Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g01224 ATGGGGATATATCTCAGCACCCCCAAAACTGAAAAATTCTCCGAAGATGGTGAGAATAGCAGAGTTAGCTTTGGTTTGTCCTCCATGCAAGGGTGGCGTGCAACCATGGAAGATGCTCATGCAGCATACCCAGACCTGGACAACTCCACATCATTCTTTGGTGTTTATGATGGGCATGGAGGTAAAGTAGTAGCTAAGTTCTGTGCGAAATACCTTCACCAACAGGTGCTCAAGAATGAAGCATACTCAGCTGGAGATTTAGGCACTTCGGTTCAGAAATCCTTTTTCAGAATGGATGAGATGATGCGCGGACAAAGAGGGTGGAGAGAGTTAGCAGTATTGGGAGATAAAATAAACAAGTTCACCGGCATGATAGAAGGGTTGATATGGTCTCCAAGGAGTGGCGAAGCTAATGACCAATTTGATGATTGGGCTTTTGAGGAGGGCCCCCACTCTGATTTCTCTGGGCCAACTTCTGGAAGCACAGCCTGTGTTGCAATCATTCGAAACAACCAACTTGTTGTTGCAAATGCCGGTGATTCTCGTTGTGTGATATCGAGAAAGGGTCAGGCATACAATTTGTCAAGAGATCACAAACCTGAGCTTGAGGTCGAGAAAGAACGGATTCTAAAAGCTGGTGGTTTCATCCATGCAGGGCGTGTCAATGGAAGCTTAAACTTAGCAAGAGCAATTGGTGACATGGAATTCAAACAGAACAAATTTTTGCCTGCAGAAAAGCAAATTGTAACTGCCAATCCGGACATAAACACTGTTGAGCTCTGTGATGATGATGATTTTATGGTGCTAGCATGTGATGGTATTTGGGATTGCATGTCAAGCCAGCAACTAGTAGATTTTGTTCGCGAACAGTTAAACAATGAAAGCAAGCTCTCAGTGGTATGTGAAAGAGTACTTGACAGGTGTTTGGCGCCATCAACTGCTGGTGGAGAGGGATGCGACAACATGACCATGATCTTGGTGCAGTTCAAGAAACCACCTGTACAGTCCAGTCAACCTGTGGAGGAGCAGTTGTCGCAGTCTGAACCTGTAGAGACCGAATCAAAACCGGCAGAGATCGAATCAAAGTAA 1089 0.4518 MGIYLSTPKTEKFSEDGENSRVSFGLSSMQGWRATMEDAHAAYPDLDNSTSFFGVYDGHGGKVVAKFCAKYLHQQVLKNEAYSAGDLGTSVQKSFFRMDEMMRGQRGWRELAVLGDKINKFTGMIEGLIWSPRSGEANDQFDDWAFEEGPHSDFSGPTSGSTACVAIIRNNQLVVANAGDSRCVISRKGQAYNLSRDHKPELEVEKERILKAGGFIHAGRVNGSLNLARAIGDMEFKQNKFLPAEKQIVTANPDINTVELCDDDDFMVLACDGIWDCMSSQQLVDFVREQLNNESKLSVVCERVLDRCLAPSTAGGEGCDNMTMILVQFKKPPVQSSQPVEEQLSQSEPVETESKPAEIESK* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g01224 362 CDD PP2Cc 22 329 IPR001932 -
Eupl09g01224 362 MobiDBLite consensus disorder prediction 333 352 - -
Eupl09g01224 362 ProSiteProfiles PPM-type phosphatase domain profile. 23 329 IPR001932 -
Eupl09g01224 362 SMART PP2C_4 11 327 IPR001932 -
Eupl09g01224 362 PANTHER PROTEIN PHOSPHATASE 2C 16 328 IPR015655 GO:0004722|GO:0006470
Eupl09g01224 362 Pfam Protein phosphatase 2C 140 313 IPR001932 -
Eupl09g01224 362 Pfam Protein phosphatase 2C 24 103 IPR001932 -
Eupl09g01224 362 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169
Eupl09g01224 362 SUPERFAMILY PP2C-like 3 331 IPR036457 -
Eupl09g01224 362 Gene3D - 1 330 IPR036457 -
Eupl09g01224 362 MobiDBLite consensus disorder prediction 333 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g01224 Eupl-Chr9 24323114 24343151 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g01224 1 339 PP2C-type Phosphatase Gene Family AT2G25070 78.761 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g01224 K17499 - psom:113300034 664.84