Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g01219 ATGCATTGCCGAGGTTGGAAATCCATATACTGCATGCCCAACAGGCCTGCATTCAAGGGGTCAGCACCCATCAAACTTTCGGACTGTCTCAACCAAGTACTCCGCTGGCCTCTTGGCTCCGTTGAGATCTTCTTCAGTCGCCATAGCCCCGTCTGGTGTGGCTACAAAGGTGAAAACCTCAAGTGGCTTGAGCGTTCCGTGTACGTCAACACCACTGTCTACCCCTTCACCTCTTCTTGCCTATTGCACCCTCCCCGCCATTTGCTTGCTCACTGGAAAATTCATCACGCCTACGTAAGCACATTTGCAAGTCTCTTCTTCATCGCGCTGTTCATCTCAATTTTCGCAACAGGCATACTGGAACTAAGATGGAGTAGGGTGAGCATTGAGGAATGGAGAAATGAACAATTCTGGGTCATTGGTGGTGTGTTAGCGCATCTCTTTGCGGTTGTGCAGGGCCTTCTCAAGGTCTTGGCTGGAATTGACACCAACTTTACTGTCATATCCAAAGCCTCTGACGACGAAGAGTTTGGAGAGCTATACACATTTAAATGGACCACCCTCCCGATCCCTCCCATCGCTCTCCTAATCATCAACCTTGTTGGAGTAGTCGCCGGGATATCTGATGCTATCAATAATGGGTATCAATCATGGAGTCCGCTCTTCGGGAAGCTCTTCTTCGCCTTTTGGGTTATTGTTCATCTCTACCCATTCCTCAAGGGTCTTATGGGGAGGCAGAACCGGACACCCACCATCGTTGTCATCTGA 768 0.4961 MHCRGWKSIYCMPNRPAFKGSAPIKLSDCLNQVLRWPLGSVEIFFSRHSPVWCGYKGENLKWLERSVYVNTTVYPFTSSCLLHPPRHLLAHWKIHHAYVSTFASLFFIALFISIFATGILELRWSRVSIEEWRNEQFWVIGGVLAHLFAVVQGLLKVLAGIDTNFTVISKASDDEEFGELYTFKWTTLPIPPIALLIINLVGVVAGISDAINNGYQSWSPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVI* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g01219 255 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 1 251 - -
Eupl09g01219 255 Pfam Cellulose synthase 1 255 IPR005150 GO:0016020|GO:0016760|GO:0030244
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g01219 Eupl-Chr9 24115341 24116277 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g01219 1 255 Cell Wall Biosynthesis AT5G17420 78.927 2.35e-136 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g01219 K10999 - vvi:100248512 413.305