Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g01208 ATGGGCGTAAGTAGATTCGCAAAGTTTAATTCTCTATGTTTGATTGTTGTTTTTCTAGTCGTCCGTGGAGAAGATAATGTTCGAATATCGAATGATCGAGCTTCGCTGCTATCGTTCATGTCGGGTATTGTTTCCGACCCTCAATATGCTCTTGAGAGCTGGAATTCTTCGGGTTTGCACGTATGCAATTGGACAGGAATCCAATGTAACAGTACAAAAGATCGTGTCGTGCAGCTCGACCTCGGTGGGAGATCGCTTCGAGGAACGATTTCTCCAGCTCTCTCGAATCTTTCTTTCTTAGTAGTCCTTGATTTATCCGGCAACTTATTCAGCGGTCGGATACCGACAGAGCTCGGTGCTCTTTTCCGGCTCAAACAGCTCAGTTTCTCATCTAATCTTCTTGAAGGCGAGATTCCCGCCGAATTGGGTTATCTTCATAAGTTGGTTTATCTTGATTTAGGTAGTAATCAGCTTGTGGGTCAGATTCCAATGTCACTCCTATGCAATTGCTCATCTTCATTAGAGTATATAGATCTTTCTAACAACTCTCTTAGTGGCGAAATCCCTTTGTCGAATCGTTGCGAGCTCATTGAGTTGAGATTTCTTCTTCTATGGTCGAACAGGCTGGTGGGTCAGGTTCCTTCGGCTCTTTCGAACTCGTCGAAACTCGAATGGCTTGATTTAGAATCAAACTCGCTTACCGGGGAGTTACCGTCGGAGATTGTACATAAAATGCCACAGTTGCAATTCCTCTACTTGTCCTATAATAACTTTGTTAGTCATGATGGAAACAAAAATCTCAGACCCTTCTTTGCTTCTCTTGTTAATTGTTCTAATTTTCAAGAACTCGTATTAGCGGGTAACGATCTTGGTGGAAAGATACCTTCTATAATCGGCGATCTTTCGACTAATCTTGTACAGATTCATCTGGGAGAGAATCTTATCTATGGTTCAATTCCTCCTAGCGTTTCAAATCTTGTTAACCTCACCCTCTTAAACTTATCTAGTAATCTCTTGAACGGATCGATTCCACCGGAAATATGTCGAATGGGAAGACTAGAGAGAGTTTATTTGTCAAACAACTCACTCTCTGGTGAAATTCCTTCAGCTTTCAGCAACATTCATCACTTGGGTCTTCTAGATTTGTCGAAAAACAGGCTCTCGGGTTCGATTCCGGATACTTTATCTAATCTCTCTCAGCTCAGAAGGCTGTTGCTTCATGAAAATCACCTATCAGGAACAATACCACCAAGCTTAGGAGAATGTATAAACCTAGAGATCTTAGACCTTTCTCATAATAGAATTTCAGGGATGATTCCTGATGAAGTTGCAGGATTGTCGAGTTTGAAATTGTACTTGAATTTGTCTAGCAATCTCTTACAAGGTTCTATACCATTAGAGCTGAGTAAAATGGATATGGTTCTAGCCATGGATCTGTCGTCGAACAACCTCTCGGGTGTAATCCCGCCTCAACTCGGAAGCTGCATTGCCCTTGAGTATCTGAACCTTTCGAGCAATCTCCTCGACGGCCCTCTTCCATTTCGAATCGGCGAATTACCTTATCTTGAAGTACTTGATATATCTTCAAACCAATTGGTTGGAGAAATACCACAATCTCTACAGGTATCGTCGACTCTCAGGAAATTGAACATCTCTTTCAACAGCTTCTCTGGGATTGTACCAAATGAGGGAGTGTTTGCGTCGATAACATCAGATTCTCTCCAAGGAAACTCCGGTCTCTGTGCAGGTTTGATCATCGGTATGCCAACATGCCGGAAAAAAGGGATTCATCGGTTAATAATCTTGCCAATTCTCATCACATTACTTGCCACTCCTATACTATGCCTCTTCGGGTACCCTCTAGTGCACAGGGCAAGAAGCAGACGGCCATCAGCGATCTTCGGTGACGATTCGTTGGAGGACGAAGAACAAGAGAAACAGCCCAAGTACCCGAGAATCTCCTATCGCCAACTCGTAGAAGCCACTGGTGGGTTCAATGGTTCAAGCCTAATTGGGTCGGGTAGGTTCGGGCATGTCTATAAGGGGGTTCTCCGAGACGATACAAGAATCGCCGTCAAGGTTCTTGATTCGACGATGGGTGGAGAGATCTCAGGGAGTTTTAAGAGAGAATGCCAAGTACTAAAGAGGACTAGACACAGGAATCTGATAAGGATAATAACAGCTTGTAGTAGGCCAGACTTCAAAGCTCTTGTTCTTCCATTGATGCCTAATGGGAGCCTAGAGAACCATCTATATCCTAGCCATGGGTCGAGCCATGGTTTGACCTTGGTTCAGTTGGTGAGCATCTGTAGTGATGTAGCTGAAGGGGTGGCCTACTTGCACCATCATTCTCCCGTTCGAGTTGTACACTGTGATCTGAAGCCGAGCAATATACTTCTCGACGCCGACATGACGGCGGTTGTGACCGATTTTGGGATTTCAAGGTTGGTGAAGGGTGGTGGTGAGAGTGCTGCAGTTTTGGATTCGTCTTCCTTCAGTTCTACGGCCGGATTGTTATGCGGATCGATCGGTTACATTGCTCCGGAATATGGTATGGGGAGGCAAGCTTCGACGCAAGGAGACGTCTACAGCTTCGGGGTCCTGCTCCTAGAGATTGTAACCGGAAAACGACCCACCGACGTCCTTTTTCACCAAGGTTCGAGCTTGCACGAATATGTCAAGAGTTACTACCCATATAAGCTCGACCCACTAATTAAAGAAGCGTTGCTGAGGTCTCCGCCGCCACCGGCTACTCCGGTTTACTCTAGCAAGATATGGCAAGATGTAGTCTTAGAGATGATCGAGCTGGGTCTGATGTGCACACAGTACTCTCCTTCAACGAGACCGAGCATGATGGACGTGGCCCACGAGATGGGCTGGTTGAAACAGTACCTCATCTCTAACCCTTCCACCCTAACCATTGAAGAAGCTTCTTGA 2937 0.4515 MGVSRFAKFNSLCLIVVFLVVRGEDNVRISNDRASLLSFMSGIVSDPQYALESWNSSGLHVCNWTGIQCNSTKDRVVQLDLGGRSLRGTISPALSNLSFLVVLDLSGNLFSGRIPTELGALFRLKQLSFSSNLLEGEIPAELGYLHKLVYLDLGSNQLVGQIPMSLLCNCSSSLEYIDLSNNSLSGEIPLSNRCELIELRFLLLWSNRLVGQVPSALSNSSKLEWLDLESNSLTGELPSEIVHKMPQLQFLYLSYNNFVSHDGNKNLRPFFASLVNCSNFQELVLAGNDLGGKIPSIIGDLSTNLVQIHLGENLIYGSIPPSVSNLVNLTLLNLSSNLLNGSIPPEICRMGRLERVYLSNNSLSGEIPSAFSNIHHLGLLDLSKNRLSGSIPDTLSNLSQLRRLLLHENHLSGTIPPSLGECINLEILDLSHNRISGMIPDEVAGLSSLKLYLNLSSNLLQGSIPLELSKMDMVLAMDLSSNNLSGVIPPQLGSCIALEYLNLSSNLLDGPLPFRIGELPYLEVLDISSNQLVGEIPQSLQVSSTLRKLNISFNSFSGIVPNEGVFASITSDSLQGNSGLCAGLIIGMPTCRKKGIHRLIILPILITLLATPILCLFGYPLVHRARSRRPSAIFGDDSLEDEEQEKQPKYPRISYRQLVEATGGFNGSSLIGSGRFGHVYKGVLRDDTRIAVKVLDSTMGGEISGSFKRECQVLKRTRHRNLIRIITACSRPDFKALVLPLMPNGSLENHLYPSHGSSHGLTLVQLVSICSDVAEGVAYLHHHSPVRVVHCDLKPSNILLDADMTAVVTDFGISRLVKGGGESAAVLDSSSFSSTAGLLCGSIGYIAPEYGMGRQASTQGDVYSFGVLLLEIVTGKRPTDVLFHQGSSLHEYVKSYYPYKLDPLIKEALLRSPPPPATPVYSSKIWQDVVLEMIELGLMCTQYSPSTRPSMMDVAHEMGWLKQYLISNPSTLTIEEAS* 979
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g01208 978 Pfam Leucine Rich Repeat 522 541 IPR001611 GO:0005515
Eupl09g01208 978 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 645 741 - -
Eupl09g01208 978 Pfam Leucine rich repeat 198 258 IPR001611 GO:0005515
Eupl09g01208 978 Pfam Leucine rich repeat 352 411 IPR001611 GO:0005515
Eupl09g01208 978 SMART LRR_typ_2 196 220 IPR003591 -
Eupl09g01208 978 SMART LRR_typ_2 398 422 IPR003591 -
Eupl09g01208 978 SMART LRR_typ_2 145 169 IPR003591 -
Eupl09g01208 978 SMART LRR_typ_2 423 445 IPR003591 -
Eupl09g01208 978 SMART LRR_typ_2 326 350 IPR003591 -
Eupl09g01208 978 SMART LRR_typ_2 245 273 IPR003591 -
Eupl09g01208 978 SMART LRR_typ_2 374 397 IPR003591 -
Eupl09g01208 978 SMART LRR_typ_2 97 121 IPR003591 -
Eupl09g01208 978 SUPERFAMILY L domain-like 31 260 - -
Eupl09g01208 978 ProSitePatterns Serine/Threonine protein kinases active-site signature. 788 800 IPR008271 GO:0004672|GO:0006468
Eupl09g01208 978 Gene3D Phosphorylase Kinase; domain 1 635 740 - -
Eupl09g01208 978 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 371 594 - -
Eupl09g01208 978 SUPERFAMILY Protein kinase-like (PK-like) 648 956 IPR011009 -
Eupl09g01208 978 Pfam Leucine Rich repeat 422 436 IPR001611 GO:0005515
Eupl09g01208 978 SMART serkin_6 665 961 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl09g01208 978 Gene3D Transferase(Phosphotransferase) domain 1 742 969 - -
Eupl09g01208 978 PRINTS Leucine-rich repeat signature 425 438 - -
Eupl09g01208 978 PRINTS Leucine-rich repeat signature 519 532 - -
Eupl09g01208 978 ProSitePatterns Protein kinases ATP-binding region signature. 671 693 IPR017441 GO:0005524
Eupl09g01208 978 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 271 367 - -
Eupl09g01208 978 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 742 971 - -
Eupl09g01208 978 ProSiteProfiles Protein kinase domain profile. 665 961 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl09g01208 978 Pfam Leucine rich repeat N-terminal domain 30 70 IPR013210 -
Eupl09g01208 978 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 29 194 - -
Eupl09g01208 978 CDD STKc_IRAK 671 958 - -
Eupl09g01208 978 Gene3D Ribonuclease Inhibitor 197 592 IPR032675 -
Eupl09g01208 978 Gene3D Ribonuclease Inhibitor 29 196 IPR032675 -
Eupl09g01208 978 Pfam Protein kinase domain 668 956 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl09g01208 978 ProSiteProfiles Leucine-rich repeat profile. 424 445 IPR001611 GO:0005515
Eupl09g01208 978 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 351 958 - -
Eupl09g01208 978 SUPERFAMILY L domain-like 324 581 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g01208 Eupl-Chr9 23896971 23901741 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g01208 32 971 Receptor kinase-like Gene Family AT3G47570 35.735 6.89e-170 521
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Eupl09g01208 Pkinase 5.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g01208 - - vri:117925687 1390.17