Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g01183 ATGGATCTAACAAGTTTTGGAGGTGCATATGATGATGAAGAGGCAGCAGCACATGCATATGACTTGGCAGCATTGAAGTACTGGGGACAAGAAACCATCCTTAATTTTCCTCTATCGATGTACCAAGAGGCGCTACAAGAAATGGAAGGTCAGTCCAAAGAAGAATATATTGGATCTTTGAGAAGGAAGAGTAGCGGGTTTTCTCGAGGAGTCTCAAAATACCGAGGTGTCGCAAGGCATCATCACAATGGAAGATGGGAAGCTCGGATCGGCCGAGTATTCGGCAACAAATACCTCTACCTTGGAACATACGCTACCCAAGAGGAAGCGGCGACGGCATACGACATGGCAGCTATTGAGTACCGTGGACTTAACGCCGTTACTAACTTTGACCTCAGCCGTTACATTAAATGGCTCCGACCCAACTCCAATAATGCTCACTCTCTTAACCCTAACCCTAGTCCGAGTCCGAGTCCGACTCCAAACCCTAGTCAAGAACATGGATTAAGCTTCCTCCATGACCAGAGCTCCGGCACCGTTGAAACGGCAGTCGCTCAGCCACTGCCGGTCGGAGGCGCCTCTCCCTCGTCGGCGCTGGGACTTCTTTTACAGTCGTCCAAATTCAAAGAGATGCTCGAGAGGACATCGGCAGTTGATTATCCATCGACGCTACAGGAATCTGACCCACCTCGGTGCAGCTTCCCTGAAGACATACAAACGTACTTCGAGTGTCAGGATTCGGGTAGCCTCGGTGAGGGAGACAACGACGTTATCTTCGGCGATTTGAACTCGTTCGCATCGCCGATCTTTCAGTGCGAGCTGGACGCGTGA 831 0.5054 MDLTSFGGAYDDEEAAAHAYDLAALKYWGQETILNFPLSMYQEALQEMEGQSKEEYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYATQEEAATAYDMAAIEYRGLNAVTNFDLSRYIKWLRPNSNNAHSLNPNPSPSPSPTPNPSQEHGLSFLHDQSSGTVETAVAQPLPVGGASPSSALGLLLQSSKFKEMLERTSAVDYPSTLQESDPPRCSFPEDIQTYFECQDSGSLGEGDNDVIFGDLNSFASPIFQCELDA* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g01183 276 Gene3D AP2/ERF domain 4 39 IPR036955 GO:0003700|GO:0006355
Eupl09g01183 276 Gene3D AP2/ERF domain 72 133 IPR036955 GO:0003700|GO:0006355
Eupl09g01183 276 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 8 193 - -
Eupl09g01183 276 SUPERFAMILY DNA-binding domain 72 133 IPR016177 GO:0003677
Eupl09g01183 276 MobiDBLite consensus disorder prediction 146 171 - -
Eupl09g01183 276 ProSiteProfiles AP2/ERF domain profile. 1 37 IPR001471 GO:0003700|GO:0006355
Eupl09g01183 276 ProSiteProfiles AP2/ERF domain profile. 73 131 IPR001471 GO:0003700|GO:0006355
Eupl09g01183 276 SMART rav1_2 5 43 IPR001471 GO:0003700|GO:0006355
Eupl09g01183 276 SMART rav1_2 73 137 IPR001471 GO:0003700|GO:0006355
Eupl09g01183 276 Pfam AP2 domain 72 123 IPR001471 GO:0003700|GO:0006355
Eupl09g01183 276 FunFam AP2-like ethylene-responsive transcription factor 72 133 - -
Eupl09g01183 276 SUPERFAMILY DNA-binding domain 8 39 IPR016177 GO:0003677
Eupl09g01183 276 CDD AP2 72 133 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g01183 Eupl-Chr9 23459803 23467949 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g01183 8 275 AP2-EREBP Transcription Factor Family AT1G79700 59.259 7.09e-82 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Eupl09g01183 AP2 5e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g01183 K09285 - aew:130750008 382.874