Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g01169 ATGGTCTTCGTCAAAAATGTCCATCATTCCTCCTCTGTAACTCCAATGGCGTTCCAAGTATTCTTTCTCTTGTTCTTTCTCTCCTCTGCAACTTTTTCTTTCTCTTATGAACCTCGCAACCATGAAGTGGAGGCCTTGATCAGTATTAGAAGAGCTTTGAATGATCCTCATGGGGTTCTCAACAACTGGGATGAAGATTCAGTGGATCCTTGTAGCTGGGCTATGATCACTTGTTCCGCAGAAAACCTCGTTATTGCACTGGGAGCTCCAAGCCAGAATCTATCAGGAATTTTGTCTGGGAGAATTGGGAATCTAACTAATCTTCGACAAGTGTTATTGCAGAACAACAACATTTCTGGAGAAATCCCACCAGAGCTTGGAGGTCTTCCCAAGCTTCAGACCTTGGATCTCTCTAATAACCGGTTTTCTGGCGTTGTTCCTCAGACACTGGGTCAGCTGAACACTCTTCAATACCTGAGGCTGAACAATAACAGCTTGTCTGGAGCTTTTCCCGTGTCTTTAGCGAAAATCCCTCAACTTGCTTTCTTGGATTTGTCTTTTAACAACCTCAGCGGACCCGTGCCCAAGTTTCCCGCCAGAACATTCAACATTGTGGGAAACCCTCTGATATGTGGAAGTCTCTCTACCGAAGGTTGCTCTGGAACGGCCACCCCTGTTCCTCTTTCCTTCTCTCTTAATTCATCACAGAGAAAACCAAAGACCCAGAAACTAGCCGTTGCAATAGGAGCTAGCGTCGGCTCTGCATTTCTCTTCCTAGTACTCGGCCTCCTCTTCTGGTGGAGAAGAAGTCAAAAGAACCAAACCGTCTTGAACATCAACGACAAACAAGAGGAGGGACTGATAAGCTTAGGAAACCTGAGACAGTTCACGCTGAGAGAGCTACAATTGGCGACGGAGAATTTCACCTCGAAGAACATATTGGGGCAAGGAGGGTTCGGGAATGTTTATAAAGGCAGGTTGGGAGACGGGACGGTGGTGGCAGTGAAGAGGTTGAAGGACGTGAGCGGCGCCACCGGGGAGTTGCAGTTTAAGACGGAGGTGGAGATGATAAGCCTGGCGGTTCACCGTAACTTACTCAGGCTGGTGGGCTTCTGCGCCACCTCCAACGAGAGGCTCCTTGTCTACCCTTACATGTCTAATGGCAGCGTTGCTTCAAGGCTCCGAGTGAGACGTTCGTGTCCGGTGTTAATGGCAACAGGGAAACCAGCGCTTGACTGGAACACAAGGAAGAGGATAGCGCTGGGAGCAGCTAGAGGTCTACTGTATCTGCACGAGCAATGCGACCCCAAGATAATCCACAGGGACGTGAAGGCTGCTAACGTGCTCCTGGACGACTTCTGCGAGGCTATCGTCGGTGACTTCGGCCTTGCCAAGCTGCTTGACCACGCCGACTCCCACGTCACCACTGCCGTCCGTGGCACCGTCGGACACATCGCACCAGAGTACCTCTCGACGGGTCAGTCGTCCGAAAAGACGGATGTCTTCGGCTTCGGTATTCTGTTGTTGGAGCTGATCACTGGAATGAGAGCTCTAGAGTTCGGTAAAGCGATTAACCAGAAAGGAGCCATGATTGATTGGGTGAGGAAAATACAGCAAGAGAAGAAGGTGGAGTTGCTGGTGGATAAAGACCTAGGGAGCAACTATGACCGGATAGAAGTGGGAGAAATGGTGCAAGTGGCTCTACTCTGCACTCAATACCTCCCAGCCCACAGACCCAAGATGTCCGAAGTGGTCCGAATGCTCGAGGGCGACGGTCTAGCCGACAAGTGGGAAGCCTCTCAACAAAACACCAGAGATACCACCACCACCAACAACAATCACAGTACTACTCCTAAGAACACCACCAAACATGATGATGCCAACATGTTTGTCATAATGATGGACGATGATGATGAGCACTCCTTGGATGTCCATGCCATGGAGCTCTCTGGTCCAAGATAA 1962 0.4985 MVFVKNVHHSSSVTPMAFQVFFLLFFLSSATFSFSYEPRNHEVEALISIRRALNDPHGVLNNWDEDSVDPCSWAMITCSAENLVIALGAPSQNLSGILSGRIGNLTNLRQVLLQNNNISGEIPPELGGLPKLQTLDLSNNRFSGVVPQTLGQLNTLQYLRLNNNSLSGAFPVSLAKIPQLAFLDLSFNNLSGPVPKFPARTFNIVGNPLICGSLSTEGCSGTATPVPLSFSLNSSQRKPKTQKLAVAIGASVGSAFLFLVLGLLFWWRRSQKNQTVLNINDKQEEGLISLGNLRQFTLRELQLATENFTSKNILGQGGFGNVYKGRLGDGTVVAVKRLKDVSGATGELQFKTEVEMISLAVHRNLLRLVGFCATSNERLLVYPYMSNGSVASRLRVRRSCPVLMATGKPALDWNTRKRIALGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHADSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKAINQKGAMIDWVRKIQQEKKVELLVDKDLGSNYDRIEVGEMVQVALLCTQYLPAHRPKMSEVVRMLEGDGLADKWEASQQNTRDTTTTNNNHSTTPKNTTKHDDANMFVIMMDDDDEHSLDVHAMELSGPR* 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g01169 653 MobiDBLite consensus disorder prediction 600 624 - -
Eupl09g01169 653 SMART serkin_6 308 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl09g01169 653 SUPERFAMILY L domain-like 40 304 - -
Eupl09g01169 653 FunFam Somatic embryogenesis receptor-like kinase 1 385 608 - -
Eupl09g01169 653 Pfam Leucine rich repeat 130 190 IPR001611 GO:0005515
Eupl09g01169 653 SUPERFAMILY Protein kinase-like (PK-like) 289 589 IPR011009 -
Eupl09g01169 653 MobiDBLite consensus disorder prediction 600 627 - -
Eupl09g01169 653 FunFam Somatic embryogenesis receptor kinase 1 277 384 - -
Eupl09g01169 653 SMART LRR_typ_2 153 184 IPR003591 -
Eupl09g01169 653 SMART LRR_typ_2 129 152 IPR003591 -
Eupl09g01169 653 SMART LRR_typ_2 105 128 IPR003591 -
Eupl09g01169 653 Gene3D Transferase(Phosphotransferase) domain 1 385 608 - -
Eupl09g01169 653 Gene3D Ribonuclease Inhibitor 39 221 IPR032675 -
Eupl09g01169 653 ProSitePatterns Serine/Threonine protein kinases active-site signature. 438 450 IPR008271 GO:0004672|GO:0006468
Eupl09g01169 653 ProSiteProfiles Protein kinase domain profile. 308 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl09g01169 653 ProSitePatterns Protein kinases ATP-binding region signature. 314 336 IPR017441 GO:0005524
Eupl09g01169 653 Gene3D Phosphorylase Kinase; domain 1 277 384 - -
Eupl09g01169 653 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 20 599 - -
Eupl09g01169 653 Pfam Protein tyrosine and serine/threonine kinase 311 588 IPR001245 GO:0004672|GO:0006468
Eupl09g01169 653 FunFam Putative LRR receptor-like serine/threonine-protein kinase 39 221 - -
Eupl09g01169 653 Pfam Leucine rich repeat N-terminal domain 40 79 IPR013210 -
Eupl09g01169 653 PRINTS Leucine-rich repeat signature 132 145 - -
Eupl09g01169 653 PRINTS Leucine-rich repeat signature 177 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g01169 Eupl-Chr9 23204780 23210620 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g01169 22 653 Receptor kinase-like Gene Family AT5G16000 64.062 0.0 827
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Eupl09g01169 PK_Tyr_Ser-Thr 1.3e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g01169 - - nnu:104605385 1040.8