Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g01166 ATGGTGGTGATCGAACCAGAATCGAACGCCGTTAAGGAAGGAACTGCTCAAAATCCTGTAAATTCACCTGAATTAACTGAAGAAACAACGGGTAGGGATGCGGAAGGCTTCGAAACAGCCAGCGAAGGAGAATGCGATGGCGAAGAACAATCTGCCCCTCCAAAAGATGACTCTTTCGAAGATGCACTGACCGATGAGCAGTTGAAACAGAGAGCTATAAGTCAAGCCAATGATGCAAAAGCCGAAGGCAATAAATTTTTTGTGGCTGGGCAGTATGAAGATGCGTTATCACAATATGAGCTTGCTTTACAGCTCGCTCCCGAGATGCCTTCATCTGTGGAAATCCGTTCCATATGTCATGCAAACCGGGCTACATGCTTCTCGAAACTGGGAAGATATGAGGACACTATTAAGGAATGCACGAAAGCATTGGAGTTGAATCCTACTTATATGAAAGCTCTGGTTAGAAGAGGAGAGGCACATGAAAAGCTTGAGCACTTTGAAGAGGCTATTGCAGACTTGAAGAAAATCTTGGAGTTGGATCCTTCAAACGACCAAGCTAGGAGAGCCATTCGGCGTCTAGAACCTTTGGCTGCAGAAAAGAGAGAAAAGATGAAGGAAGAGATGATTGGGAAGCTAAAAGAAATGGGTAACTCCTTATTAGGGCGCTTTGGGATGAGCGTTGACAACTTTAAAGCTGTTAAAGATCCAAACACTGGGTCATATTCTCTCTCGTTCCAGCGTGAGTAG 750 0.448 MVVIEPESNAVKEGTAQNPVNSPELTEETTGRDAEGFETASEGECDGEEQSAPPKDDSFEDALTDEQLKQRAISQANDAKAEGNKFFVAGQYEDALSQYELALQLAPEMPSSVEIRSICHANRATCFSKLGRYEDTIKECTKALELNPTYMKALVRRGEAHEKLEHFEEAIADLKKILELDPSNDQARRAIRRLEPLAAEKREKMKEEMIGKLKEMGNSLLGRFGMSVDNFKAVKDPNTGSYSLSFQRE* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g01166 249 SUPERFAMILY TPR-like 73 195 IPR011990 GO:0005515
Eupl09g01166 249 MobiDBLite consensus disorder prediction 11 27 - -
Eupl09g01166 249 Gene3D Tetratricopeptide repeat domain 36 215 IPR011990 GO:0005515
Eupl09g01166 249 ProSiteProfiles TPR repeat region circular profile. 151 184 - -
Eupl09g01166 249 SMART tpr_5 76 109 IPR019734 GO:0005515
Eupl09g01166 249 SMART tpr_5 151 184 IPR019734 GO:0005515
Eupl09g01166 249 SMART tpr_5 117 150 IPR019734 GO:0005515
Eupl09g01166 249 ProSiteProfiles TPR repeat profile. 151 184 IPR019734 GO:0005515
Eupl09g01166 249 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 1 28 248 - -
Eupl09g01166 249 MobiDBLite consensus disorder prediction 1 60 - -
Eupl09g01166 249 ProSiteProfiles TPR repeat profile. 117 150 IPR019734 GO:0005515
Eupl09g01166 249 ProSiteProfiles TPR repeat profile. 76 109 IPR019734 GO:0005515
Eupl09g01166 249 Pfam Tetratricopeptide repeat 152 184 IPR001440 GO:0005515
Eupl09g01166 249 Pfam Tetratricopeptide repeat 119 150 IPR001440 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g01166 73 207 Calmodulin-binding Proteins AT3G25230 37.063 2.36e-16 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g01166 K24926 - ming:122089991 391.349