LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Eupl09g01161	ATGGAGAAGAAGAAGTATCCAATCGGACCTGAGTCTTATAATCTGTACGAGGATATAGGGCAGGGCGTCAGTGCTTCTGTCTACCGCGCGCTCTGTGTCCCTTTTAATGAGATTGTTGCGATCAAGATACTCGATTTCGAGAGAGATAACAGCGATCTGAGTAACATTTCTCGTGAAGCACAAACTATGATCTTGGTTGACCACCCTAATGTTCTTAAGGCTCACTGTTCCTTTGTTAGTGATCATAGTTTGTGGGTTGTCATGCCATTCATGGCTGGAGGTTCTTGTCTTCATATACTGAAGGCTGCTTATCCAGATGGTTTTGAGGAGGTGGTTATAGCAACCATTTTACGTGAAATATTAAAGGGCTTAGAGTATCTTCATCATCATGGGCACATACATCGGGATGTCAAGGCTGGAAATATTCTGCTTGATGCACGTGGTACAATTAAGCTTGGAGATTTTGGTGTTTCTGCTTGCCTTTTTGATGCCGGGGAGAGGCAGCGGATAAGAAATACTTTTGTGGGGACACCTTGCTGGATGGCACCTGAGGTTATGGAGCAATTACGCGGTTATGACTTCAAGGCAGATATGTGGTCTTTTGGTATAACTGCCTTGGAGCTTGCGCACGGTCACGCCCCTTTCTCAAAGTATCCTCCGATGAAGGTCTTGCTGATGACCTTGCAAAATGCACCACCTGGCCTTGATTATGAAAGGGACAGAAAGTTCTCTAAGTCTTTTAAGCAAATGATTGCCATGTGCTTAGTAAAAGATCCATCTAAACGTCCTTCAGCACAGAAGCTATTAAAGCATTCCTTCTTCAAACAAGCTAGGTCCAATGATTATATTGTACGAACAATTTTAGAGGGGTTGCCTACTCTAGGGGATCGCCTTAAAGCATTGAAGAGAAAGGAAGAAGACATGCTTGCACAAAAGAAAATGCCAGATGGGAAGAAGGAGGAAATATCCCAGAACGAATACAAACGAGGGATTAGTGGTTGGAACTTCAATATTGAAGATTTGAAGGCACAGGCATCACTGATACAAGATGTTGAAGAAACAATCCCTGACAAAGATCAAGGAGGGAACTCGAATTCTTTATTTGGGCTTGATATACAGGAAAAGCAATCACAAGGCCAGCCCTCTACCATGAAGGATGATGATGCAGATAAAGAAGATGATGATGCGATGCGGAATAGGCCAGCTCCTCTTCCATTAGACGACTTGACTTTGAATTATCTCAAAGGTAGATGTGATAGGTCTGAGGATGAATCAAGTGCTGGTGGTTCAAGTTGCGAAAACAATAATTCACCGCATGGTTTGCAGTGTCAGGATGATCACATTGAAAATGACTTGAATGCAAAGTCTATATTTGAGATCAATGGAAAGCATTTAGAGGATATGGTGGTTCATTCTCGCAACAGGAGGGGAGGTTCATCAGGCACTCGCTTACCGGACCATTCTCTTACTCAATTCAAAGGAGAGAGCGACAAGCAGCAATGCCAGGCCCCGAACAAGCTAAGTTGCAATGGAGTAGTGGTTCCACAATCAGTAGATGATGCATCTTCTGAAACTCTGTCTAGAGTATCTAAGTCGTCAGCATCAAATGGTGAGGATCTTGATGAAAAAGCGAAGGTGCCAGTTGTCCAGCAAAAAGGACGTTTCAAAGTGACATCTGATAATGTCGACCTTGAAAAGGTGCCTCCATCTCCTATGCTTCAAAAGAGTCACAGCGTGCAGGTGTTCACCCAACTTCCTTCAAATTGTCCACCTTTACCATCTGATGCCACATCATCAAACCCTCTTGGCTATTCACTTTTTCCACAGTTGCACAGTGTTTTGCAGACAAATATTCTTCAAAGGGAGAATATTTTAAGTTTGATGAAGCAAGTCTCCACTGGTGATTTTACAGCTAATCGTGCTGCTGATGGAGGATATATGCATGTACCTACGGCCGTAACGGAGAAGTCTTTGCTGGAGGCAGCCCATGATAGGGAGAAGGAGCTACTGCAGGAAATGACTGAGTTGCAGTGGAGGCTCATATGTGCCCAAGAGGAGCTCCAGAGGTATAAAATGAAAAATGCTCAGGTATGA	2094	0.4365	MEKKKYPIGPESYNLYEDIGQGVSASVYRALCVPFNEIVAIKILDFERDNSDLSNISREAQTMILVDHPNVLKAHCSFVSDHSLWVVMPFMAGGSCLHILKAAYPDGFEEVVIATILREILKGLEYLHHHGHIHRDVKAGNILLDARGTIKLGDFGVSACLFDAGERQRIRNTFVGTPCWMAPEVMEQLRGYDFKADMWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIAMCLVKDPSKRPSAQKLLKHSFFKQARSNDYIVRTILEGLPTLGDRLKALKRKEEDMLAQKKMPDGKKEEISQNEYKRGISGWNFNIEDLKAQASLIQDVEETIPDKDQGGNSNSLFGLDIQEKQSQGQPSTMKDDDADKEDDDAMRNRPAPLPLDDLTLNYLKGRCDRSEDESSAGGSSCENNNSPHGLQCQDDHIENDLNAKSIFEINGKHLEDMVVHSRNRRGGSSGTRLPDHSLTQFKGESDKQQCQAPNKLSCNGVVVPQSVDDASSETLSRVSKSSASNGEDLDEKAKVPVVQQKGRFKVTSDNVDLEKVPPSPMLQKSHSVQVFTQLPSNCPPLPSDATSSNPLGYSLFPQLHSVLQTNILQRENILSLMKQVSTGDFTANRAADGGYMHVPTAVTEKSLLEAAHDREKELLQEMTELQWRLICAQEELQRYKMKNAQV*	698

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Eupl09g01161	697	Gene3D	Transferase(Phosphotransferase) domain 1	94	327	-	-
	Eupl09g01161	697	FunFam	serine/threonine-protein kinase BLUS1 isoform X1	94	327	-	-
	Eupl09g01161	697	ProSiteProfiles	Protein kinase domain profile.	13	274	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Eupl09g01161	697	ProSitePatterns	Protein kinases ATP-binding region signature.	19	42	IPR017441	GO:0005524
	Eupl09g01161	697	FunFam	Serine/threonine-protein kinase BLUS1	2	90	-	-
	Eupl09g01161	697	Coils	Coil	659	693	-	-
	Eupl09g01161	697	Pfam	Protein kinase domain	13	274	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Eupl09g01161	697	SUPERFAMILY	Protein kinase-like (PK-like)	11	275	IPR011009	-
	Eupl09g01161	697	MobiDBLite	consensus disorder prediction	518	534	-	-
	Eupl09g01161	697	MobiDBLite	consensus disorder prediction	374	445	-	-
	Eupl09g01161	697	Gene3D	Phosphorylase Kinase; domain 1	1	90	-	-
	Eupl09g01161	697	PANTHER	SERINE/THREONINE-PROTEIN KINASE FRAY2	1	691	IPR047173	GO:0043539
	Eupl09g01161	697	MobiDBLite	consensus disorder prediction	475	503	-	-
	Eupl09g01161	697	SMART	serkin_6	13	274	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Eupl09g01161	697	MobiDBLite	consensus disorder prediction	384	401	-	-
	Eupl09g01161	697	MobiDBLite	consensus disorder prediction	427	443	-	-
	Eupl09g01161	697	MobiDBLite	consensus disorder prediction	518	543	-	-
	Eupl09g01161	697	MobiDBLite	consensus disorder prediction	473	503	-	-
	Eupl09g01161	697	CDD	STKc_OSR1_SPAK	11	274	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Eupl09g01161	Eupl-Chr9	23008729	23031323	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Eupl09g01161	1	679	MAP Kinase Kinase Kinase Kinase	AT1G79640	62.427	0.0	818

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	STE_STE20-Fray	Eupl09g01161		Pkinase	6.7e-60	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Eupl09g01161	K08835		-	msin:131256878	995.342