Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g01160 ATGGATTTGATAAAAAATCAGATCAAAACCATCAACGAAGAGGAAGATTGCTTGTTTGCCATGCAATTGGTAAGTGCGTCGGTCCTACCCATGGTCATGCAAGCAGTGATTGAGCTCGACGTGCTGGAGATTATAGCTAGAGCAGGTGAGGGTGCGCACTTGTCCCCAACAGAAATCGCATCTCACATTCCCACTCAAAACCCAGAAGCCCCCATTATGCTCGATCGTATGCTGCGCATGCTAGCTACCTATTCTGTGCTCTCTTCCTCTCAAATCACCCATGATAATGAGAAAGTTGAAACGCTGTATGGATTGGCACCTGTCTGCAAATACTTGGTTCTGAACGCAGATGGAGTTTCGTTTTCTCCCTGGTTGTTCTTCATTCAAGACAAGGTCCTTATGGACAACTGGTACTACTTGAAAGACGCAGTTCTTAAAGGAGGGATTCCGTTCAACAAGGCCCACGGAATAAACTTGTTCGAGTACTCTGGCATAGACACTAGATTCAATCAGGCCTTCAATGGAGCAATGTTCAATCACACAACCATAATTATGAAGAAGATTCTTGAGACATACAAGGGGTTTGAGAACTTGAAAGAGCTGGTCGATGTAGGTGGAGGGGTCGGAACCGTGATTAACATAATTACTTCCAAGTATACTACAATTAAGGGTATTAACTTTGATTTGCCTCACGTGATAGAACACGCGCCATCCTATCCAGGTGTTGAACATGTAGGAGGAGATATGTTTGTAAGCGTTCCCAAAGGAGAAACTATTTTCATGAAGTCGATACTTCATGATTGGAACGATGAACACTGCTTGACGTTATTGAAGAATTGTTATGAAGCCCTACCAGATCATGGGAAGATGATTGTCGTCGAGGCCATTGTTCCAGAAGTCACTGAGATTAATGTCGCTGCAAAAGGTCTCTGTCAAATGGACCTTCTCATGATGACACATTGCCCTGGAAGGGAAAGGACGGAGAAAGAGTTCAAGGCCTTGGCAAAGGGAGCTGGATTTGTTGGTATTAGACTGGTGTGTTTTGTTTGTAACCATTGGTCGATACTTCATGATTGGAACGATGAACGCTGCTTGACGTTATTGAAGAATTGTTATGAAGCCCTACCAGATCGTGGGAAGCTGATTGTCGTGGAGTCGCTTGTTCCAGAAGTCCCTGAGACTAATGTCGCTGCAAAAGGCCTCTGTCAAATGGACCTTCTCATGATGACACATTGCCCTGCAGGAAGGGAGAGGATGGAGAAAGAGTTCAAGGCCTTGGCAAAGGGAGCTGGATTTGCTGGTATTAGACTGGTGTGTTGTGTTTTTAACCATTGGGTAATGGAAATCTATAAAATGATGTGA 1362 0.4427 MDLIKNQIKTINEEEDCLFAMQLVSASVLPMVMQAVIELDVLEIIARAGEGAHLSPTEIASHIPTQNPEAPIMLDRMLRMLATYSVLSSSQITHDNEKVETLYGLAPVCKYLVLNADGVSFSPWLFFIQDKVLMDNWYYLKDAVLKGGIPFNKAHGINLFEYSGIDTRFNQAFNGAMFNHTTIIMKKILETYKGFENLKELVDVGGGVGTVINIITSKYTTIKGINFDLPHVIEHAPSYPGVEHVGGDMFVSVPKGETIFMKSILHDWNDEHCLTLLKNCYEALPDHGKMIVVEAIVPEVTEINVAAKGLCQMDLLMMTHCPGRERTEKEFKALAKGAGFVGIRLVCFVCNHWSILHDWNDERCLTLLKNCYEALPDRGKLIVVESLVPEVPETNVAAKGLCQMDLLMMTHCPAGRERMEKEFKALAKGAGFAGIRLVCCVFNHWVMEIYKMM* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g01160 453 SUPERFAMILY "Winged helix" DNA-binding domain 13 113 IPR036390 -
Eupl09g01160 453 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 117 353 IPR029063 -
Eupl09g01160 453 FunFam Caffeic acid 3-O-methyltransferase 2 112 - -
Eupl09g01160 453 Gene3D Vaccinia Virus protein VP39 114 351 IPR029063 -
Eupl09g01160 453 Gene3D Vaccinia Virus protein VP39 352 451 IPR029063 -
Eupl09g01160 453 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 356 451 IPR016461 GO:0008168
Eupl09g01160 453 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 360 IPR016461 GO:0008168
Eupl09g01160 453 PANTHER O-METHYLTRANSFERASE 353 432 IPR016461 GO:0008168
Eupl09g01160 453 FunFam Caffeic acid O-methyltransferase 113 355 - -
Eupl09g01160 453 Pfam O-methyltransferase domain 137 340 IPR001077 GO:0008171
Eupl09g01160 453 Pfam O-methyltransferase domain 354 433 IPR001077 GO:0008171
Eupl09g01160 453 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 354 449 IPR029063 -
Eupl09g01160 453 Pfam Dimerisation domain 31 82 IPR012967 GO:0046983
Eupl09g01160 453 Gene3D - 3 112 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g01160 Eupl-Chr9 22996583 23006849 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g01160 355 453 Monolignol Biosynthesis Gene Families AT5G54160 47.475 9.23e-29 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g01160 K13066 - nnu:104585771 467.233