Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g01147 ATGGATTTAGCAAGGAAGGAAGTCATGCGTCCTCCTACCTCATTCAAGCAAGAATTTCTCAAGAAATGGGTACTGGGTCTACAATTCTGTGGTTCTTCGATAAAGAACAGAAGCATCTTGGACAGAAAGAAGGCTATCAAGCTATCGGCAGATGTAGCCATGGCTTCTGCTAGAGATGGTAAGACTTGTTGGAGCCGTGCCCTTATTGCTAACGCTACAAAACAAGATGAGAACAAGATCATTGTTAAATCTATATTGGGTGATGATTTCGAGAAGCTAACCAAGCCTTCTATAATCGGATCTCTTGTGTGCAACAAAAGGGTTAGAAGCAAGAAGATCTTGAGAAGAAGCTGCACCTTGCGTAGGATAAGAAAAAGTGCGCCTCGGCGAGTTTTAGCAAGCTCCATTGCTAAGAGAATGGTGAAGAAAAGGACCCAAGTGCTGAAAGGTCTGGTACCTGGTGGAGAATCCATGGATGAGTTATCTTTGTTAGAGGAAACCCTGGACTACATCCTCTCTCTCCGAGCTCAAGTTGATGTAATGCGACAGTTTACTAATGCATCTGAGCTCTAA 573 0.4346 MDLARKEVMRPPTSFKQEFLKKWVLGLQFCGSSIKNRSILDRKKAIKLSADVAMASARDGKTCWSRALIANATKQDENKIIVKSILGDDFEKLTKPSIIGSLVCNKRVRSKKILRRSCTLRRIRKSAPRRVLASSIAKRMVKKRTQVLKGLVPGGESMDELSLLEETLDYILSLRAQVDVMRQFTNASEL* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g01147 190 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 13 187 IPR044660 GO:0006355
Eupl09g01147 190 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 141 184 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g01147 Eupl-Chr9 22819576 22820808 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g01147 9 189 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30410 48.913 2.78e-46 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g01147 - - nnu:104605357 255.373