Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g01113 ATGTATGTATCTGAATCCCATGACGGCATGGAGTTCAAGAAGGAGAAGCTAGTGAGGTTTTATCCTGATGTTAAACAACACCTTGAAGTGCCATGGGAAAATCCTGATTCTTCGCAATTAGAAAAGCGAGGTGGTGGGGGTAGAAATAGAATACCTGGGACTGTGAAATTTGGGAAGTCTAAGGTTTTTCCTGAGGACCATGAGCCATGGCGTAAAAGGATACTCGATCCAGGAAGTGAGCTTGTCTTGCAATGGAACCGTGTTTTCCTTTTCTCGTGCTTGGTGGCTCTTTTTGTCGACCCATTGTATTTTTACCTGCCTTCGGTCAGTTCTGTGGGGGTGTCTTCCTGTATGAAGACGGATTTGAATCTGAGAATTGTTGTGACCTGTTTTCGAACTATTGCCGATCTGTTCTACTTGTTGCACATGGTCATAAAGTTCCGGACAGCATATGTAGCGCCGAGCTCACGGGTGTTTGGGAGGGGTGAACTTGTTATGGATCCCAAGAAGATTGCAAGGAGGTACTTAAAATCAGATTTCTTTATAGATCTGGCAGCAACACTGCCTCTCCCCCAGATTGTCATCTGGTTTATTATACCAGCAATTAGAAGCTCCCACGCTGATCATAACAATAATGCCCTTGCGTTGATTGTTCTGCTCCAATATGTTCCCAGATTATATCTAATTTTCCCATTAAGTTCTCAGATTATCAAAGCTACTGGAGTTGTCACGAAAACTGCTTGGGCTGGGGCTGCATATAATCTGCTACTGTATATGTTAGCTAGTCATGTACTGGGGGCATCATGGTATTTGCTGTCGATTGAACGGCATACAACATGCTGGAAATCAGAATGCAGAAAGGAAGCTAGCCCTATAAAGTGCAGTCTTAATTATTTAGACTGTGATACTTTCAACCATGGTGATCGCCAGAGTTGGGCACTCAGTACAGCTGTGTTTAATAACTGTGATCCTACCAATGAAATTAGTTTCAATTATGGCATATTTGAAAATGCCATGACCAATAAAGCTGTCTCCTCAGCGTTTCTTGTGAAATACTTCTATTGTCTCTGGTGGGGTTTACAGAACCTAAGTTCATATGGGCAGAATTTGTCAACAAGCACTTTTATTGGGGAAACCTCATTTGCCATACTCATTGCCATTGTGGGTCTGGTTTTATTCGCCCATCTGATTGGGAACATGCAGACATACTTGCAATCAATCACTGTGAGGCTTGAGGAATGGAGACTTAAGCGAAGGGACACTGAAGAGTGGATGAGACATCGCCAACTCCCTCAAGATTTGCGGGAACGTGTCCGGCGGTTTGTTCAATACAAATGGCTTGCAACACGAGGTGTAGATGAAGAAGTTATCCTGCATGCCTTACCTACTGATCTCCGTCGAGATATCCAACGACACCTATGCTTGGACCTTGTTCGACGTGTCCCCTTTTTCTCACAGATGGATGACCAGCTTCTTGATGCCATATGTGAGCGTCTAGTGTCGTCCTTGAGCACTGAAGACACCTACATTGTTCGCGAGGGTGATCCTGTGTCGGAGATGCTCTTTATTATCAGAGGGAGGCTAGAGAGTTCTACTACCAATGGAGGCAGGACTGGTTTCTTCAATTCAATTACTTTGAGACCTGGGGATTTTTGTGGGGAGGAGCTGCTTGCATGGGCATTGCTTCCAAAATCCACTCTCAACTTGCCTTCTTCAACAAGGACGGTTAGAGCCCTTGTTGAAGTGGAAGCCTTTGCATTGCGAGCGGAAGATCTCAAGTTTGTAGCCAATCAGTTCAGACGCCTCCATAGTAAGAAGCTACAGCACACCTTCCGTTTCTACTCTCACCATTGGAGGACTTGGGCAGCCTGCTTCATACAGGCTGCTTGGCGTCGGTTCAAGAGGAGGAGGATGGCGAAGGACCTCAGCATGCAGGAGTCCTTTGCTTCAGGCGAACAAGTGACCGATGAGACAGGACAAGAGGAAGAGGACTATGGCACTGGCTCAGCAAATCCTTCTCAGGCAAAACAGAACCTTGGGGTCACAATACTCGCTTCAAGGTTTGCCGCGAACACAAGGAGAGGAGCTCAGAAGATCAAGGGAGTTCAGTTGCCTAAGTTACAGAAGCCTGAAGAACCAGACTTCTCTGTCGAGCCTGATGACGACGAGTAG 2172 0.4586 MYVSESHDGMEFKKEKLVRFYPDVKQHLEVPWENPDSSQLEKRGGGGRNRIPGTVKFGKSKVFPEDHEPWRKRILDPGSELVLQWNRVFLFSCLVALFVDPLYFYLPSVSSVGVSSCMKTDLNLRIVVTCFRTIADLFYLLHMVIKFRTAYVAPSSRVFGRGELVMDPKKIARRYLKSDFFIDLAATLPLPQIVIWFIIPAIRSSHADHNNNALALIVLLQYVPRLYLIFPLSSQIIKATGVVTKTAWAGAAYNLLLYMLASHVLGASWYLLSIERHTTCWKSECRKEASPIKCSLNYLDCDTFNHGDRQSWALSTAVFNNCDPTNEISFNYGIFENAMTNKAVSSAFLVKYFYCLWWGLQNLSSYGQNLSTSTFIGETSFAILIAIVGLVLFAHLIGNMQTYLQSITVRLEEWRLKRRDTEEWMRHRQLPQDLRERVRRFVQYKWLATRGVDEEVILHALPTDLRRDIQRHLCLDLVRRVPFFSQMDDQLLDAICERLVSSLSTEDTYIVREGDPVSEMLFIIRGRLESSTTNGGRTGFFNSITLRPGDFCGEELLAWALLPKSTLNLPSSTRTVRALVEVEAFALRAEDLKFVANQFRRLHSKKLQHTFRFYSHHWRTWAACFIQAAWRRFKRRRMAKDLSMQESFASGEQVTDETGQEEEDYGTGSANPSQAKQNLGVTILASRFAANTRRGAQKIKGVQLPKLQKPEEPDFSVEPDDDE* 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g01113 723 FunFam Cyclic nucleotide-gated ion channel 1 410 474 - -
Eupl09g01113 723 Gene3D Jelly Rolls 481 601 IPR014710 -
Eupl09g01113 723 SUPERFAMILY cAMP-binding domain-like 413 605 IPR018490 -
Eupl09g01113 723 Pfam Cyclic nucleotide-binding domain 507 594 IPR000595 -
Eupl09g01113 723 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 65 715 - -
Eupl09g01113 723 CDD CAP_ED 483 614 IPR000595 -
Eupl09g01113 723 SUPERFAMILY Voltage-gated potassium channels 81 405 - -
Eupl09g01113 723 ProSiteProfiles cAMP/cGMP binding motif profile. 483 566 IPR000595 -
Eupl09g01113 723 PRINTS EAG/ELK/ERG potassium channel family signature 446 453 IPR003938 GO:0005249|GO:0006813|GO:0016020
Eupl09g01113 723 PRINTS EAG/ELK/ERG potassium channel family signature 260 270 IPR003938 GO:0005249|GO:0006813|GO:0016020
Eupl09g01113 723 PRINTS EAG/ELK/ERG potassium channel family signature 143 152 IPR003938 GO:0005249|GO:0006813|GO:0016020
Eupl09g01113 723 PRINTS EAG/ELK/ERG potassium channel family signature 378 389 IPR003938 GO:0005249|GO:0006813|GO:0016020
Eupl09g01113 723 PRINTS EAG/ELK/ERG potassium channel family signature 396 405 IPR003938 GO:0005249|GO:0006813|GO:0016020
Eupl09g01113 723 MobiDBLite consensus disorder prediction 644 676 - -
Eupl09g01113 723 Gene3D - 102 409 - -
Eupl09g01113 723 Pfam Ion transport protein 85 410 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Eupl09g01113 723 FunFam Cyclic nucleotide-gated ion channel 1 481 599 - -
Eupl09g01113 723 Gene3D Helix hairpin bin 411 474 - -
Eupl09g01113 723 SMART cnmp_10 483 614 IPR000595 -
Eupl09g01113 723 MobiDBLite consensus disorder prediction 695 723 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g01113 Eupl-Chr9 22270061 22288571 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g01113 19 718 Ion Channels AT2G24610 70.793 0.0 1041
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g01113 K05391 - nnu:104612360 1234.55