Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g01112 ATGTTTCTAACGGTCAGGGAAGCTGCTTCTTCACCCGTCTTCTTCAATCTCTCGACGATCTCTCGCACTCCCAAAACCTCTCCAAAGCCACGGAGAAATTTGATTTGCAGAGCGAGCTTTTCTGTCGAGAGAAAATCCAACAACAACTCCACATGGAAGCTCGGTCTTCCCTTCAACAAGAGATGTGATGGCTCAGTTTTTGATCCATTGGGTATCAATTCAGATGCATCTTTGGGTCTTAATGCTGCTTGGGAAAGTATTGTAGACTTGTTTTCCCAAACATTTGAGAGCACATCAAGTACAAGAAAGGAGAAGCCTTCATCAACTCGGGGAGCGGCAGCTGCAATTGAAGATAGCTCTATTGATTTTGGCGACTTCTTCAAAGGCCCATTACCAGGAAAGTTCCTCAAGCTCTTAGGTTTTTTAGTCCTATCTCGACTTGGAATATATGTGCCTTTAGGTGGGGTCAACCGAGAGGCTTTTGTTGGTAATTTGGATCAGAACAGTCTCCTGAGCACGTTGGATTCATTTTCTGGTGGAGGCATTGGTCGACTTGGGATATGTTCCCTTGGTATTGTTCCTTTTATCAATGCACAGATTGTATTTCAGCTTTTGACACAGATTTACCCCAAATTGCAAGAACTTCAGAAAAGAGAAGGTGAAGCTGGAAGGAAGAAAATTCTTCAGTATACTCGCTATGCTTCAGTTGGGTTTGCAGTAGTACAGGCAATTGGTCAAGTACTTTATCTTCGTCCCTATGTCAACGACTTCAGTACACAGTGGGTGCTTTCATCTGTGACACTATTGACCCTAGGATCAGTGTTTACAACTTACATTGGGGAACGGATCTCTGACTTGAAACTCGGGAATGGGACATCTCTTTTGATCTTCACAAGCATTATCTCGTACTTGCCTGCATCATTTGGTAGGACAGTTGCTGAGGCCTTTCAGGATGGGAACTACGTTGGGCTTGTCACCATCGTCATTTCCTTCTTTCTATTAGTCCTTAGCATTGTGTACGTCCAGGAAGCTGAGAGGAAAATCCCACTTAACTATGCTTCAAGATACAGCAGTAGAAGTGGGGGCCTTGAAAAATCTGCCTACCTTCCCTTCAAGGTGAATAGTTCTGGAGTGATGCCAATCATATTTTCTACATCATCATTGGCTCTCCCCGGTACTCTAGCACGCTTCACTGGTATAGCTGCTTTGAAAAAGGCTGCAGTTGCTCTAAACCCAGGAGGTGCTCTCTATCTCCCTACCAATGTATTATTAATAGCCTTCTTCAATTATTACTACACTTTTCTACAATTGGATCCCGATGATGTGAGCGAACAGTTGAAGCGCCAAGGTGCATCAATCCCACTTGTCCGACCTGGGAAAAGCACAGCTGCATTTCTTAAAACAGTTCTTAGCCGGATATCAGTTCTGGGTTCTGCCTTTTTGGCACTACTGGCTGCTGGTCCCGCTGTGATTGAACAAACTACGCATTTGACTGCTTTTCGTGGATTCGCTGGCACTTCTGTTCTCATTCTTGTAGGGTGTGCAACAGACACAGCAAGAAAAGTTCAAGCAGAGATAATATCACAGAAGTACAAGAACATAGAATTCTACGACATGGACAAGTACGGCCCGTAA 1635 0.4416 MFLTVREAASSPVFFNLSTISRTPKTSPKPRRNLICRASFSVERKSNNNSTWKLGLPFNKRCDGSVFDPLGINSDASLGLNAAWESIVDLFSQTFESTSSTRKEKPSSTRGAAAAIEDSSIDFGDFFKGPLPGKFLKLLGFLVLSRLGIYVPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLTQIYPKLQELQKREGEAGRKKILQYTRYASVGFAVVQAIGQVLYLRPYVNDFSTQWVLSSVTLLTLGSVFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAEAFQDGNYVGLVTIVISFFLLVLSIVYVQEAERKIPLNYASRYSSRSGGLEKSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGIAALKKAAVALNPGGALYLPTNVLLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSAFLALLAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNIEFYDMDKYGP* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g01112 544 ProSitePatterns Protein secY signature 1. 186 205 IPR030659 -
Eupl09g01112 544 Gene3D SecY subunit domain 126 531 IPR023201 -
Eupl09g01112 544 PRINTS Preprotein translocase SecY subunit signature 259 284 - -
Eupl09g01112 544 PRINTS Preprotein translocase SecY subunit signature 135 153 - -
Eupl09g01112 544 PRINTS Preprotein translocase SecY subunit signature 504 522 - -
Eupl09g01112 544 PRINTS Preprotein translocase SecY subunit signature 185 205 - -
Eupl09g01112 544 PRINTS Preprotein translocase SecY subunit signature 376 395 - -
Eupl09g01112 544 PRINTS Preprotein translocase SecY subunit signature 227 250 - -
Eupl09g01112 544 PRINTS Preprotein translocase SecY subunit signature 285 308 - -
Eupl09g01112 544 PRINTS Preprotein translocase SecY subunit signature 415 437 - -
Eupl09g01112 544 PRINTS Preprotein translocase SecY subunit signature 470 488 - -
Eupl09g01112 544 ProSitePatterns Protein secY signature 2. 278 295 IPR030659 -
Eupl09g01112 544 Pfam SecY 187 518 IPR002208 GO:0015031|GO:0016020
Eupl09g01112 544 NCBIfam preprotein translocase subunit SecY 134 531 IPR002208 GO:0015031|GO:0016020
Eupl09g01112 544 FunFam Preprotein translocase subunit SECY, chloroplastic 126 531 - -
Eupl09g01112 544 SUPERFAMILY Preprotein translocase SecY subunit 127 525 IPR023201 -
Eupl09g01112 544 Hamap Protein translocase subunit SecY [secY]. 123 535 IPR026593 -
Eupl09g01112 544 PANTHER SECY/SEC61-ALPHA FAMILY MEMBER 127 534 IPR002208 GO:0015031|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g01112 Eupl-Chr9 22260094 22269516 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g01112 40 544 Chloroplast and Mitochondria Gene Families AT2G18710 83.922 0.0 865
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g01112 K10956 - cave:132190556 867.84