Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g01101 ATGGTTCGCGAGATGGGGGGTGATTATCTTGAAGAAATGGACATAGACGTCCTTCCTTCCATGTGGCCCGAAGATCTTGGAAATGAAGCTGGAAAGAAGTTTAATGTAGAAAAGCCCGGGGTGGATCAAGATATGTTGGAGGAGGTTACAATCATAGAAGAACCTTCCATAGTTGATTTCAAGCGCCTCCTAGAGTTAACCAATTATAGTGAGAAGGGAAACTCTCAGTTGGCATACCTTGTAAAGCATTGGGAGTATAAGCAGGCTAATGCTGTTCGCCTTCTCAATGAAGAGCTTGACATCCTAAGCAAACAAAGGCAGGAAGTGGAGCTCAAGAAATTGGAGATTCTTGAAGAGCATCGATTTGTAGAAGATAAATATGCTGGTGACAAGCGCCCAATTTCCATACTGGATGAAGTTTATGATTTATGGGAAGCTGTACCCCGGAGAAGAAATGATATCATTGTTCAAAACAAAAGACTTGAAATAGATGCTGAGTATGACACCATTAAGTACTGGAAGCAGAGGGCCATGCAACTGGATAAAATGTTGGAGGCAAGTATCCAGAGAGAGCAGACACTCATAGAGAAGCTGCAGGAAAGCATAAAAAATCTGGAAAGGGAGTCCTCACCAGTAGAAGAATTGTCTCAGATTTTGAAAAGAGCAGATAATTTCTTACATTTTGTTCTCCAGAATGCACCAGTTGTAATCGGCCATCAGGACAAAGAGTTGCGCTATCGGTTCATTTATAACCATTTTCCAAGTCTGCAAGAGGAGGACATCATAGGAAGAACGGATATGGAAATATTTTCTGGAGCTGGTGTTAAGGAATCTCAGGACTTCAAGAGAGAAGTCATGGAACGTGGATTACCTGCAAAGAGGGAAATTACATTTGAGACAGAATTGTTTGGGTCGAAGACATTTTTGATATATGTGGAACCTGTATTTAGCAAGGCAGGGGATACAATTGGTGTGAATTATATGGGAATGGAGATGACTGATCAGGTGATAAAAAGAGAAAAAATGGCAAAGCTTCGAGAGGAAATAGCTGTTCAAAAAGCGAAGGAAACAGAACTCAATAAGACAATTCATATAACAGAGGAGACAATGCGAGCAAAACAAATGCTGGCAACCATGTCTCATGAGATAAGATCTCCCCTCACAGGGGTTGTTGGTATGGCTGAGATTCTTGCCAACACAAAGCTAGATCAAGAGCAACGACAGCTGTTAGATGTCATGCTATCTTCTGGGGATTTGGTCCTGCAACTTATTAATGACATTCTTGACCTTTCCAAGGTTGAGTCAGGAGTTATGAAGTTGGAAGCTACAAAATTTCGACCAAGAGAGGTAGTAAAACATGTACTCCAGACTGCCGCAGCATCATTGCAAAAGGAACTGACCTTGGAAGGACGCGTAGCAGAAGATGTTCCTGTGGAGGTTATTGGCGATGTTCTAAGGATTCGGCAAATACTTACCAACTTGATTAGCAATGCAATCAAGTTTACCCATGAAGGGAAGGTTGGGATAAACCTTTATGTGGTCCAAGATCCATATTCTGGGCAAGGAGGACACCATCAAAAGCTTACAGCAGATCAGTCTTTAGTTTCAGCAAATAAACTAAAAGAAGAGAACTCTTCTGCAGCATCACATTGTCAGACACATGGGGAAGGTCTTGACCAAAACGGTACACCCGATGATGGAGCCAGGGACTTGGTTAAGAACGCAACCTCAATTGATGGTGATACAGAGATGTGTCCTCACCCACATGAAACAACTGTGTGGATATGCTGTGATGTATATGACACAGGAATAGGAATACCAGAAAATGCGATACCTACTCTATTCAAAAAATACATGCAAGTCAGTGCAGATCATGCTCGAAAATATGGTGGAACAGGACTTGGCCTTGCAATCTGCAAACAACTGGTGGAACTGATGGGGGGTCACCTTACTGTGACCAGCACAGAGCATTGTGGTTCTACATTTACATTTGTACTACCTTATAAGGTTTCACCCAAACGGGAGCATTCTGATGACCCTGATGAACTCTCAGACATGGATGACCATGAAGTTGTATCCGATGCCAACACCGATGAAAAAAATGCTGCCTTCTTTCAGTTTCAACCACGCACATTGGGCTCTCTATTCTCATCTGGTGGATCCACTAGAACACACAAACTATCATCAAACAAAATTGGGTATAATCCTTTAAATAAGCTCAACAATTTATCAGAGGAGCCATACTCGTTCCCTTCTAGTAACAACATATCAAGAGAGACGACTTCACTTGAGGATGCATGTTCAGTGGTTGATGCTGCAGATACATTCTCTGCATCTGAAAGTTCATTAAGGCAGGACCTAGAGCCTGATAACAGCAATGCAGTTCGTAGAGACGAGCCATGTCAAAGTGATGCAAATGGCCAATTTCAAAATTCTACAATGGATTCCCTTCAGTGCACAAAGACATGCGTTGAAGTAGGTAACATGGCCAAGACTAGCAAGTTCCGAGATACATGTCAAAGGCAGGAGCATGAGAAATCTGACAGAAGCTCTCAGAGCAGCTCTAGCAGTGCGGAACTACCCAAATCCAAATTGAAACCCCAAATCCTTCTTGTGGAAGATAACAAGATTAATGTAATGGTGACCAAGTCAATGATGAGGCAGTTAGGTCACAACATAGATGTTGTGAATGATGGAGTAGAAGCTGTGCGTGCGGTTCAGAATCATAGATATGATCTCATTCTGATGGATGTCTGCATGCCAGTAATGGATGGCCTTCAAGCAACAAGGTTGATTCGCTCATTTGAGGAAACTGGCAATTGGGATGCTGCTGTAGAGGCTGGAATTGATCGACCTACAACTTCTTCAGATTCATTACCAAATGGTCTAGATGCAGTAACATCTAGGAAGCGGGTCCCCATCATTGCGATGACAGCGAATGCATTGGCGGAGAGCGCAGATGAGTGTCTTGCTAATGGTATGGACTCATTTGTATCCAAGCCGGTCACCCATCAAAAGTTGAAAGAATGTCTTCAGCAATATATACCATGTTAA 3054 0.4253 MVREMGGDYLEEMDIDVLPSMWPEDLGNEAGKKFNVEKPGVDQDMLEEVTIIEEPSIVDFKRLLELTNYSEKGNSQLAYLVKHWEYKQANAVRLLNEELDILSKQRQEVELKKLEILEEHRFVEDKYAGDKRPISILDEVYDLWEAVPRRRNDIIVQNKRLEIDAEYDTIKYWKQRAMQLDKMLEASIQREQTLIEKLQESIKNLERESSPVEELSQILKRADNFLHFVLQNAPVVIGHQDKELRYRFIYNHFPSLQEEDIIGRTDMEIFSGAGVKESQDFKREVMERGLPAKREITFETELFGSKTFLIYVEPVFSKAGDTIGVNYMGMEMTDQVIKREKMAKLREEIAVQKAKETELNKTIHITEETMRAKQMLATMSHEIRSPLTGVVGMAEILANTKLDQEQRQLLDVMLSSGDLVLQLINDILDLSKVESGVMKLEATKFRPREVVKHVLQTAAASLQKELTLEGRVAEDVPVEVIGDVLRIRQILTNLISNAIKFTHEGKVGINLYVVQDPYSGQGGHHQKLTADQSLVSANKLKEENSSAASHCQTHGEGLDQNGTPDDGARDLVKNATSIDGDTEMCPHPHETTVWICCDVYDTGIGIPENAIPTLFKKYMQVSADHARKYGGTGLGLAICKQLVELMGGHLTVTSTEHCGSTFTFVLPYKVSPKREHSDDPDELSDMDDHEVVSDANTDEKNAAFFQFQPRTLGSLFSSGGSTRTHKLSSNKIGYNPLNKLNNLSEEPYSFPSSNNISRETTSLEDACSVVDAADTFSASESSLRQDLEPDNSNAVRRDEPCQSDANGQFQNSTMDSLQCTKTCVEVGNMAKTSKFRDTCQRQEHEKSDRSSQSSSSSAELPKSKLKPQILLVEDNKINVMVTKSMMRQLGHNIDVVNDGVEAVRAVQNHRYDLILMDVCMPVMDGLQATRLIRSFEETGNWDAAVEAGIDRPTTSSDSLPNGLDAVTSRKRVPIIAMTANALAESADECLANGMDSFVSKPVTHQKLKECLQQYIPC* 1018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g01101 1017 Gene3D - 359 436 - -
Eupl09g01101 1017 MobiDBLite consensus disorder prediction 834 863 - -
Eupl09g01101 1017 Coils Coil 92 119 - -
Eupl09g01101 1017 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 482 668 IPR003594 -
Eupl09g01101 1017 SMART REC_2 867 1011 IPR001789 GO:0000160
Eupl09g01101 1017 FunFam Histidine kinase 5 213 348 - -
Eupl09g01101 1017 SUPERFAMILY CheY-like 867 1015 IPR011006 -
Eupl09g01101 1017 PRINTS Bacterial sensor protein C-terminal signature 595 609 IPR004358 GO:0016310|GO:0016772
Eupl09g01101 1017 PRINTS Bacterial sensor protein C-terminal signature 630 648 IPR004358 GO:0016310|GO:0016772
Eupl09g01101 1017 PRINTS Bacterial sensor protein C-terminal signature 654 667 IPR004358 GO:0016310|GO:0016772
Eupl09g01101 1017 Gene3D - 861 1015 - -
Eupl09g01101 1017 CDD HATPase_EvgS-ArcB-TorS-like 487 667 - -
Eupl09g01101 1017 FunFam Putative histidine kinase 5 359 436 - -
Eupl09g01101 1017 Coils Coil 188 215 - -
Eupl09g01101 1017 MobiDBLite consensus disorder prediction 778 810 - -
Eupl09g01101 1017 ProSiteProfiles Histidine kinase domain profile. 378 670 IPR005467 -
Eupl09g01101 1017 MobiDBLite consensus disorder prediction 545 559 - -
Eupl09g01101 1017 MobiDBLite consensus disorder prediction 836 850 - -
Eupl09g01101 1017 CDD HisKA 370 432 IPR003661 GO:0000155|GO:0007165
Eupl09g01101 1017 Gene3D PAS domain 213 348 - -
Eupl09g01101 1017 PANTHER TWO-COMPONENT HISTIDINE PROTEIN KINASE 13 1014 - -
Eupl09g01101 1017 SMART HKATPase_4 482 670 IPR003594 -
Eupl09g01101 1017 FunFam Histidine kinase 5 861 1016 - -
Eupl09g01101 1017 Coils Coil 342 362 - -
Eupl09g01101 1017 SMART HisKA_10 371 436 IPR003661 GO:0000155|GO:0007165
Eupl09g01101 1017 Gene3D - 437 674 IPR036890 -
Eupl09g01101 1017 Pfam His Kinase A (phospho-acceptor) domain 373 436 IPR003661 GO:0000155|GO:0007165
Eupl09g01101 1017 CDD REC_hyHK_CKI1_RcsC-like 869 1011 - -
Eupl09g01101 1017 ProSiteProfiles Response regulatory domain profile. 868 1015 IPR001789 GO:0000160
Eupl09g01101 1017 Pfam Response regulator receiver domain 869 936 IPR001789 GO:0000160
Eupl09g01101 1017 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 370 436 IPR036097 GO:0000155|GO:0007165
Eupl09g01101 1017 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 425 671 IPR036890 -
Eupl09g01101 1017 MobiDBLite consensus disorder prediction 545 571 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g01101 Eupl-Chr9 21977705 22020435 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g01101 1 1015 Histidine Kinase Gene Family AT5G10720 56.693 0.0 1103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Eupl09g01101 HATPase_c 2e-27 CL0025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g01101 - - nnu:104586694 1512.28