Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g01099 ATGATTGTGCCAATGGAGGAGGACCATTTCACAGAGGATCTCTGGTGGTTCATAAAGCCACTAAGCAATGATCTATGGCTGACTACCATTGCATTCTTTGTGTTTAAGGGACTTTTGGTCTGGATATTTGAGCATGGAACAAACCCTGAATTCCAAGGCACGCTTTCAGAACAATTGGGAAAGATTCTCTCGTTTTCCTTCTCGACATTAGTTTTTGCCCACAAAGAGAAGCTTGAAAGCAACTATTCTAGATTCATTGTGAACATGTGGACTTTTGCTGTGTTCGTACTCGTGACTAGTTATGCTGCAAATCTAACGTCCATGTTAGCAGTGGAGAATCTGAAACCGATTGTTACCGACTTAGACTATCTACTTAAAAATGGGAAGTCAGTTGGGTACCAAAACGGATCATTTGTGTTTCAACTCTTGAAGGGCATGGGTTTCGAAGAAAGAATGCTCAAGCAATTCTCCAATGTAGAGGATTATGACAAGGCTCTATCAAAAGGAAGTGACAACGGTGGAGTTTCTGCAATTGTCGATGAAATCCCATATATAAGCGTCTTCCTTGCTAAGTATTGCCATAAGTACACCATTGTTGGACGAACACATCGAACTGGGGGCTTTGGCTTCGTGTTTTCAAAAGATTCTCCCATGCTATCCGACATTTCTAAGGCAATCTTGGACTTCACTGAAGGAAATGGGATGGATGAAATTGAGAGAAAATGGTTCAAATCCGAAACATGCGTGTTCGCAACCAATGTAACATCAAATAAACTGCACCTGTATAACTTTCGCAGTATCTACGTTATCATGGCAGTCGCTTCAGCTATAACTCTCTTCTTATTTTCAGTTTCCTTCATATATAAGAGTGCAAAAGATGGCAAGTTAATGGAACTATTAGAAGGGAAAGCCTTAAAGGTGAAGAACTTTGTTATGGGCAGGTGCTTCAGGTTGCTATCACATAAATTCAAAGATACTGGACAGCCCATAAGATCAACAGAGCTACAACAAATTCATGAAGCCACTTCAGCTGCTCCTTTGGTTGAAGGAACACTGAATCATATGAACCAGGGTACACATGCTGATGAAGAAAGAGAGGGTGCAGTAGGACAAGATACAGTGGACATTGAATCGACATTGAACAACGGCTGCCGCTCGGAGATCATCCCTATAGAAGTGACTCGCACTTCTCAAAGGGAATGA 1203 0.4148 MIVPMEEDHFTEDLWWFIKPLSNDLWLTTIAFFVFKGLLVWIFEHGTNPEFQGTLSEQLGKILSFSFSTLVFAHKEKLESNYSRFIVNMWTFAVFVLVTSYAANLTSMLAVENLKPIVTDLDYLLKNGKSVGYQNGSFVFQLLKGMGFEERMLKQFSNVEDYDKALSKGSDNGGVSAIVDEIPYISVFLAKYCHKYTIVGRTHRTGGFGFVFSKDSPMLSDISKAILDFTEGNGMDEIERKWFKSETCVFATNVTSNKLHLYNFRSIYVIMAVASAITLFLFSVSFIYKSAKDGKLMELLEGKALKVKNFVMGRCFRLLSHKFKDTGQPIRSTELQQIHEATSAAPLVEGTLNHMNQGTHADEEREGAVGQDTVDIESTLNNGCRSEIIPIEVTRTSQRE* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g01099 400 FunFam Glutamate receptor 14 144 - -
Eupl09g01099 400 Pfam Ligand-gated ion channel 23 274 IPR001320 GO:0015276|GO:0016020
Eupl09g01099 400 SMART GluR_14 42 245 IPR001320 GO:0015276|GO:0016020
Eupl09g01099 400 Pfam Bacterial extracellular solute-binding proteins, family 3 109 244 IPR001638 -
Eupl09g01099 400 SUPERFAMILY Periplasmic binding protein-like II 8 246 - -
Eupl09g01099 400 Gene3D - 11 142 - -
Eupl09g01099 400 FunFam Glutamate receptor 160 208 - -
Eupl09g01099 400 Gene3D - 195 250 - -
Eupl09g01099 400 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 1 334 IPR015683 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g01099 Eupl-Chr9 21946424 21950635 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g01099 1 289 Ion Channels AT2G29120 44.674 2.38e-72 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g01099 K05387 - msin:131256123 391.349