Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g01098 ATGAAGAATTTTACTTTCCATCTCTTCTTTCTCTGTTCTTTTTCTTTGAGCTTCTACCCTTACTTGTCCATGGCTCAAAATAACAGTATCAACAACACCGCAGCCTCGTTCCATGTTGGCGTAATTCTCAACTTGAATTCGACGATTGGAAAGATAGCGGAGAGCTGCATTTCTATGGCAATTTCCGATTACTATGCTGTTCATGGTAACTACAGCTGCTTGAAGCTTGTAGTTCATGTAAGGGATTCAAAGGGAGATGTTGTTAGCGCAGCTTCTGCAGCCTTGGATTTGATAGAAAATGTTGGAGTGCAAGCAATCATAGGCCCAGAGACCTCAGAAGCAGCAGATTTCTTGGCCTATATGGGAAACAAAGCTCATGTACCCATCATTTCCTTCTCCGCAATCAGCTCCTCCCTTTCTCCTACTCAGTTCCCTTATTTTGTTCGAATTGCCCAAAATGACTCATCTCAAGTGAAAGCCATTGCTGCCATTGTCCAAGCTTACCATTGGAAAGAAGTATCTCTCATCCATGAAGACAGCCAGAGCGGGATTACTGCAATACCGTACCTTACCGATGCCCTTCAAGAGATTGGCACCATAGTACGCAATAGAACCATCCTACCCTACGACGCGAATGGAACAGTAATCAAAGATGCCTTGCTGAAGTTAAATAACACGAGGATGAGGGTCATTATCGTTCATCTATCCTCCTCTCTCGGTACTCGCTTCTTCTTAAATGTCAACGAGGTGGGAATGATGCAAGATGGGTATGCGTGGATCGTCACGTGTCAACTCACCGATCCCATGGGCTACATGAGCTCTCATGTCCTCCCTTCCATGGAAGGTGTTATAGGTGTAAGAACTTATGTGCCACCATCCCAAGCTCTACGTGAGTTTCAAAGTCAATGGAGTAGGCAATTCGAAAAAGACTACTCGAAAACACAGATATTGGACCTCAATGTGTATGCTTTGTGGGCATACGATGCAACATCTGTCATGGCAATGGCAGCTAATAGAGGTAGTTTGTGCCAAAATTCTCGATCACCACATGTCTCTCCGTTGAGTTCAAATTTCTTGCAATCTATGCTAGCAACCCAGTTTCCAGGCCTAAGTGGTAAGATTCAATTGGTAGATGGGCAGTTACAGTCCTCCACTTTTGAGATTGTTAATGTGAGGGAAAATAGTACTCAGATAATTGGGTATTGGACACCTAAAGCTGGTCTTTCCCAGAGTCTAAGCTCGAAAAGCATGAGAAAGACATATTCGACTAATGAGAAGGACCTCAATTTTGTTACTTGGCCTGAAGAAACCAAGGCTATTCCAAGTGCTAAGATATTGCAAATTGGGGTCCCTGTTAAATCAGGCTTTTTGGAGTTCGTCAACGTGAGTCGTGATTCCAAAGATGGAAGGCCAAACGTTACAGGTTACTCGACAGAGGTATTTGAAGCAGTGATGAAACTGTTAGGATACCGTTATGAGTATGCCCCATTTGTAGATGATGCCGGAGTTGCTATAGAAGATTACAACGCTCTTACTTACCAAGTATACCTCAAGGTGAGCAATTCTCATGATGAATTGAACCATACATGGTGGAGATCTTATTTATCACACACCAACACAGAATTTTCTTAG 1632 0.4314 MKNFTFHLFFLCSFSLSFYPYLSMAQNNSINNTAASFHVGVILNLNSTIGKIAESCISMAISDYYAVHGNYSCLKLVVHVRDSKGDVVSAASAALDLIENVGVQAIIGPETSEAADFLAYMGNKAHVPIISFSAISSSLSPTQFPYFVRIAQNDSSQVKAIAAIVQAYHWKEVSLIHEDSQSGITAIPYLTDALQEIGTIVRNRTILPYDANGTVIKDALLKLNNTRMRVIIVHLSSSLGTRFFLNVNEVGMMQDGYAWIVTCQLTDPMGYMSSHVLPSMEGVIGVRTYVPPSQALREFQSQWSRQFEKDYSKTQILDLNVYALWAYDATSVMAMAANRGSLCQNSRSPHVSPLSSNFLQSMLATQFPGLSGKIQLVDGQLQSSTFEIVNVRENSTQIIGYWTPKAGLSQSLSSKSMRKTYSTNEKDLNFVTWPEETKAIPSAKILQIGVPVKSGFLEFVNVSRDSKDGRPNVTGYSTEVFEAVMKLLGYRYEYAPFVDDAGVAIEDYNALTYQVYLKVSNSHDELNHTWWRSYLSHTNTEFS* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g01098 543 Gene3D - 60 383 - -
Eupl09g01098 543 Gene3D - 441 530 - -
Eupl09g01098 543 FunFam Glutamate receptor 157 316 - -
Eupl09g01098 543 PANTHER OS06G0188250 PROTEIN 11 411 - -
Eupl09g01098 543 Gene3D - 153 408 - -
Eupl09g01098 543 SUPERFAMILY Periplasmic binding protein-like I 35 403 IPR028082 -
Eupl09g01098 543 CDD PBP1_GABAb_receptor_plant 38 412 IPR044440 -
Eupl09g01098 543 Pfam Receptor family ligand binding region 56 392 IPR001828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g01098 Eupl-Chr9 21939170 21945275 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g01098 3 518 Ion Channels AT2G29100 39.591 5.67e-116 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g01098 K05387 - psom:113291838 495.352