Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g01096 ATGAAGAACCCAATACACCTTCTCTCATTTTCCCTCTCTTTCTCTATCATACTTGATCAAATTTGGGGTCACAGAACCCCAGTACCGTTTCATGTGGGGGTAGTTCTTGACATGGATTCATGGTTGGGAAAGGTAACCAACAGCTGCATGTCTATGGCACTCTCTGATTTCTACAGCAATCATACCAACTACAGAACGAGGCTGGTTCTCCACACCAGGGATTCGCAAATGGACGTTATCGGTGCTGCATCTGCAGGATTGAGTGGAGACTTCCATCTTGTCAATGGACAGTTGCAGCCATTAGCCTTCCAAATACTGAATGTGATTGGCAGAGGAGGACGAAGGGTTGGGTTCTGGACGCCAACATATGGAATTTCAAGTGATTTGAGCTCGAATAGTAAGAAAACGTACTCAACTTCAACTGCTGATTTCCGGGGCATCATCTGGCCAGGAGAATCTACGATTGTGCCAAAGGGTTGGGTAATTCCGAAGAATGGGAAGAAACTAAGGATCGGCGTCCCAGTCACAGACGGTTTTAGTGAATTTGTGAAGGTTGAACGGAACCCTCGAACGAATGCAACAACGGTCACTGGATATTGTATAGACGTGTTCAAATCTGTCATAGAATCATTGCCATACACCATCCCTTATGAGTTTGTTCCTTTCCAAAATGATGACGGTAAAAGTGCCGGGACTTACAATGATCTGATATACCAGGTCTACCTTCAGAATTACGATGCTGTTGCGGGTGATACAACAATCACAGCCAACCGATCATTGTATGTAGATTTCGCACTGCCTTATACGGATGGAGGGGTGTGGATGATAGTTCCCACCAAGCACGAGGAGGGCAAAAAAACATGGATCTTCTTTAAGCCTCTAACAATTGATATGTGGCTATTAAGCGGGGCTTTCTTCATCTTCACAGGTTTTGTGATATGGGTTCTTGAACACCGAGTAAGCCCCGATTTCAGGGTTTCAACTACTCATCATGTTGGAGAGAAGCTGGCTGGAATCTTGTCTAGGTTCTTGGTGATCATATGGTTGTTCGTAGTGCTCATATTGACATCAAGTTACATGGCTAACTTAACATCAATGTTAACTACACAAAAACTTCGACCGGCCATAACAGACTTCAAAGATCTCATAAAGAATGGAGATTGTGTAGGCTACCGCAAAGGCTCCTTTGTGTTAGAGCTTTTAAAGCGATTGAACTTTGATGAGTCTAAGTTAAAGGACTATAGCTCTCCAGAAGAGTGCCATGAGGTGTTGTCAAAAGGAAGTCAGAATGGTGGTGTAAGTGCAGTATTTGAGGAGAAACCTTACATTAATGTCTTCCGTGCAAAATATTGTTCTAAATACACCATTGTTGGACCTATACACAAGACCGACGGATTTGGCTTCGTTTTTCCAAGAGGTTCCCCTCTTTTGGCTGACATATCCAAGGCAGTATTAAATGTGACCGAGGGAGACAAATTGGAGATTGAACAAGCATGGTTTGGGCATCATACCACTTGTGACGATGACCAAAGCACCGTTGTCACTTCAAACAATTTTTGGAGCCTCTTCCTTTTTACTGGTGTCATTTCAATACTTTCTCTTATTATAGTCTCAACCAATTTCTCTCACAAGTGTAAGTGTAGACTGATTACAGTGGACTCTACAAAGTCCACCAGTCCAGACCATTATCCTACTTCTCAGAGGATTGAAGCAGCTAAAGCTTTATCACACCTCAATGATTCACAAAGCTCATCAAGCACGTCCAACTATGTGGATGGGAGTAAAATTTCTCTTAGAAGTAGAAGGGATGCAGTTAATCAAGCCTGA 1827 0.4302 MKNPIHLLSFSLSFSIILDQIWGHRTPVPFHVGVVLDMDSWLGKVTNSCMSMALSDFYSNHTNYRTRLVLHTRDSQMDVIGAASAGLSGDFHLVNGQLQPLAFQILNVIGRGGRRVGFWTPTYGISSDLSSNSKKTYSTSTADFRGIIWPGESTIVPKGWVIPKNGKKLRIGVPVTDGFSEFVKVERNPRTNATTVTGYCIDVFKSVIESLPYTIPYEFVPFQNDDGKSAGTYNDLIYQVYLQNYDAVAGDTTITANRSLYVDFALPYTDGGVWMIVPTKHEEGKKTWIFFKPLTIDMWLLSGAFFIFTGFVIWVLEHRVSPDFRVSTTHHVGEKLAGILSRFLVIIWLFVVLILTSSYMANLTSMLTTQKLRPAITDFKDLIKNGDCVGYRKGSFVLELLKRLNFDESKLKDYSSPEECHEVLSKGSQNGGVSAVFEEKPYINVFRAKYCSKYTIVGPIHKTDGFGFVFPRGSPLLADISKAVLNVTEGDKLEIEQAWFGHHTTCDDDQSTVVTSNNFWSLFLFTGVISILSLIIVSTNFSHKCKCRLITVDSTKSTSPDHYPTSQRIEAAKALSHLNDSQSSSSTSNYVDGSKISLRSRRDAVNQA* 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g01096 608 Gene3D - 169 291 - -
Eupl09g01096 608 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 77 567 IPR015683 -
Eupl09g01096 608 Pfam Bacterial extracellular solute-binding proteins, family 3 193 502 IPR001638 -
Eupl09g01096 608 SUPERFAMILY Periplasmic binding protein-like II 147 501 - -
Eupl09g01096 608 SMART GluR_14 170 502 IPR001320 GO:0015276|GO:0016020
Eupl09g01096 608 FunFam Glutamate receptor 2.7 409 508 - -
Eupl09g01096 608 Gene3D - 68 168 - -
Eupl09g01096 608 CDD GluR_Plant 167 500 - -
Eupl09g01096 608 FunFam Glutamate receptor 168 287 - -
Eupl09g01096 608 Gene3D - 324 402 - -
Eupl09g01096 608 Pfam Ligand-gated ion channel 503 526 IPR001320 GO:0015276|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g01096 Eupl-Chr9 21895822 21899966 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g01096 4 87 Ion Channels AT5G11180 35.714 9.46e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g01096 K05387 - msin:131256816 588.956