Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g01095 ATGATTGTGCCTTCCAAATTTGCGGAGAGAAAGAACATGTGGATCTTCTTCAAGCCTATGACTTGGGATCTTTGGCTTCTAAGTGTTGTATCCGTCATCTTCACTAGCATAGTGATTTGGGTTTTCGAATATGTGAGAAACCCAAATTCTGGTGGACCTCATACTCTGAAGATTGTCATGAACCTCTTTATTCCATCACCCACCCACGTCTTCACACAAGGAGAGGAAGAGTTAACAAACTTGTCTAAGTTTGTTGTGAGCATGTGGAGTGTAGTAATGTTGATTCTGGGTGCTTGTTACATGGCAAGCTTAACATCAACGCTAACAGTTCAAAGTCTCCAACTTACAGCTCCAGACATAAAAGATCTTATAAATAATGGACACTATGTAGGCTACGCAAAGGGGTCCTTCGTAAAAGGAATCCTAAAGCAATTGAACTTCGATGAGTCCAAGCTCCGGGCCTATAACTCTCTGGAAGAGTATGATGAGGCCCTAACCAAAGGAAGTCAGAATGGCGGTGTTTCTGCCATTATGGATGAGATTACATACATCAAGCTCATGTTGAAGAAGTATTGCAATAAATACACAATGGTTGGACCAACCCACAGGATGGACGGATTTGCCTTTGTTTTCCAAAGAGGCTCCCCTCTGGTGGCCGACGTTTCTAGGGCAATATTATCAGTACTAGAAGGAGAAAAAATGGCGGAGATCGAGAAGAGATGGTTGGGGCGTGAAAGTACTTGTCCAGAGCCAAGCAATACTGTCTCCTCGAACAACCTCTCCCTCAACACCTTTTTGGTGCTATTCCTCATCCCCGGAAGTGTCACGCTTTTTGCTCTAATACTATTCATTCTAGCATACAAACACAGGCATTCAAATAAACCATTTTGGAAAGGCGCCGGAGCCATATGTGGATTGAAACAGGAACAATCCACCCCAAGTAATAAAGGACTTGAAATGGCAACTCAATCAAGAACAGTTCTTACAAGTAATGAAGAACTTGATAAGGAAAGTTCGGAAACGGTAAGAACTACAGCAGCTGATGAAAGCCAAGAAGAAGCCGATCATATCTCTGAAAGCAAGTGA 1086 0.4273 MIVPSKFAERKNMWIFFKPMTWDLWLLSVVSVIFTSIVIWVFEYVRNPNSGGPHTLKIVMNLFIPSPTHVFTQGEEELTNLSKFVVSMWSVVMLILGACYMASLTSTLTVQSLQLTAPDIKDLINNGHYVGYAKGSFVKGILKQLNFDESKLRAYNSLEEYDEALTKGSQNGGVSAIMDEITYIKLMLKKYCNKYTMVGPTHRMDGFAFVFQRGSPLVADVSRAILSVLEGEKMAEIEKRWLGRESTCPEPSNTVSSNNLSLNTFLVLFLIPGSVTLFALILFILAYKHRHSNKPFWKGAGAICGLKQEQSTPSNKGLEMATQSRTVLTSNEELDKESSETVRTTAADESQEEADHISESK* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g01095 361 MobiDBLite consensus disorder prediction 309 361 - -
Eupl09g01095 361 MobiDBLite consensus disorder prediction 309 329 - -
Eupl09g01095 361 SMART GluR_14 26 244 IPR001320 GO:0015276|GO:0016020
Eupl09g01095 361 Gene3D - 9 153 - -
Eupl09g01095 361 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 1 317 IPR015683 -
Eupl09g01095 361 MobiDBLite consensus disorder prediction 330 361 - -
Eupl09g01095 361 SUPERFAMILY Periplasmic binding protein-like II 100 248 - -
Eupl09g01095 361 FunFam Glutamate receptor 2.7 150 250 - -
Eupl09g01095 361 Pfam Ligand-gated ion channel 22 271 IPR001320 GO:0015276|GO:0016020
Eupl09g01095 361 Pfam Bacterial extracellular solute-binding proteins, family 3 116 243 IPR001638 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g01095 Eupl-Chr9 21888497 21889954 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g01095 1 292 Ion Channels AT2G29110 42.177 5.37e-69 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g01095 K05387 - nnu:104606995 301.597