Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g01094 ATGTTGTTACCGCTTTTTTTGCAGTTCATGACTGCAGCTCTGAAACTGTTGAAACATGAGGAGGTACAAGTGATCATTGGCCCTCAAAAATCGACACAGTCTGAATTTGTAATGGATCTCGGTAATAAAACTCATGTGCCTATTGTTTCTTTCTCTGCGACAAGCCCTTCCCTTTCCAATAGAACTCCTTATTTTATCCGAATGGCCCCAAATGACTCCTATCAGTTGAAAGCCGTTGCTGCCATCATTCAAGCTTTTGGATGGAAGGAAGTTGTTCCTGTTTATGAAGACACAGACTATGGAAATGGAATCGTACCTTATCTGATTGACACCTTCCAAGAAATTGATGTCCGCATCCCTTACAGAAGTGTTATTCCTCCTTCAGCCACTGAAGACCAGATTCTCCAAGAACTTCACAAGTTGTTGAAAATGCAAACTAGAGTATTCCTAGTGCACATGTCATCTTCTCTTGGCTCCCATTTTTTTCTAAAGGTAAAAGAGTTGGGGCTGATGAGTGAAGGTAGTGCATGGATTATCACAGATGGACTGACAAATCTATTGGATTCCATGGATTATTCTGTCATTGATTCAATGGAAGGTGTCTTAGGAATAAAGCCTTATGTTCCAAGGTCAATAGAACTTGACAATTTCAAGGCAAAATGTAAGAGGAAATTCCGCCAGGATCATCCAAATTCTGAAAGGTTCGGGTTTAACACTTATTGTTTGTATGCGTACGATACCATCTGGGCACTTGCAACGGTAGCAGAAAGAGTTGATAAAATGAATATTCACTTTCGAAAACCAAAAGGCTTTAGAAGTTCAACTCACTTAGCAGAGCTGGGAATCTCTCAAATGGGTCCAAAACTTCTGAAAGCAATCTTAACAACTGAATTTAAAGGTTTGAGCGGTGAAATACGTCTAGTCAATCAGCAATTGCAACCACAAGTCTTTCAGATACTCAATGTGATTGGTAAAGGGGAGCGACCAATTGGATTCTGGATGCCTACAGTTGGAATTTCACAGGGATTGAATGTGGCTAGAACAAAAATGCACTCGACCTCAAAATCCGATCTTCGGGCTATCATTTGGCCAGGAGGATCAACCACTGTGCCCAAGGGTTGGGTGATTCCAACTTCTGGAAGGAAACTAAGGGTAGCAGTTCCAGCGAAAGATGGTTTTAATGAATTTGTGAAAGTGGAACGGGACCCTAGCACCAATGCAACAATAGTCACTGGATATTGCATAGACATTTTCAATTCGGTAATGGAAGCCTTACCTTACGTTGTCCCTTATGAATTTATTCCCTTTCAGAAGCCTAATGGTGAGAGCGCTGGGAGTTGGGATGATCTAGTTTACCAAGTTGATCTTCAGGTCAGTTATATTTTTGAATTTTGA 1395 0.4093 MLLPLFLQFMTAALKLLKHEEVQVIIGPQKSTQSEFVMDLGNKTHVPIVSFSATSPSLSNRTPYFIRMAPNDSYQLKAVAAIIQAFGWKEVVPVYEDTDYGNGIVPYLIDTFQEIDVRIPYRSVIPPSATEDQILQELHKLLKMQTRVFLVHMSSSLGSHFFLKVKELGLMSEGSAWIITDGLTNLLDSMDYSVIDSMEGVLGIKPYVPRSIELDNFKAKCKRKFRQDHPNSERFGFNTYCLYAYDTIWALATVAERVDKMNIHFRKPKGFRSSTHLAELGISQMGPKLLKAILTTEFKGLSGEIRLVNQQLQPQVFQILNVIGKGERPIGFWMPTVGISQGLNVARTKMHSTSKSDLRAIIWPGGSTTVPKGWVIPTSGRKLRVAVPAKDGFNEFVKVERDPSTNATIVTGYCIDIFNSVMEALPYVVPYEFIPFQKPNGESAGSWDDLVYQVDLQVSYIFEF* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g01094 464 SUPERFAMILY Periplasmic binding protein-like I 9 376 IPR028082 -
Eupl09g01094 464 Gene3D - 282 381 - -
Eupl09g01094 464 PANTHER OS06G0188250 PROTEIN 8 341 - -
Eupl09g01094 464 FunFam Glutamate receptor 77 235 - -
Eupl09g01094 464 FunFam Glutamate receptor 246 381 - -
Eupl09g01094 464 Pfam Receptor family ligand binding region 10 323 IPR001828 -
Eupl09g01094 464 Gene3D - 78 238 - -
Eupl09g01094 464 SUPERFAMILY Periplasmic binding protein-like II 359 454 - -
Eupl09g01094 464 CDD PBP1_GABAb_receptor_plant 7 343 IPR044440 -
Eupl09g01094 464 PRINTS Metabotropic glutamate GPCR signature 25 51 IPR000337 GO:0004930|GO:0007186|GO:0016020
Eupl09g01094 464 PRINTS Metabotropic glutamate GPCR signature 75 91 IPR000337 GO:0004930|GO:0007186|GO:0016020
Eupl09g01094 464 PRINTS Metabotropic glutamate GPCR signature 91 108 IPR000337 GO:0004930|GO:0007186|GO:0016020
Eupl09g01094 464 PRINTS Metabotropic glutamate GPCR signature 56 75 IPR000337 GO:0004930|GO:0007186|GO:0016020
Eupl09g01094 464 Gene3D - 382 458 - -
Eupl09g01094 464 Gene3D - 8 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g01094 Eupl-Chr9 21884744 21888150 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g01094 11 456 Ion Channels AT2G24720 50.557 3.41e-153 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g01094 K05387 - nnu:104586704 584.719