Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g01093 ATGAAGACTCCGATTCCGCAATCTCCATTTTTGTTCTTGCTCTCTTACTCTCTGACTATCTGCTGCATACGAGCAGCAGCTCGCAATGGTGGTATTAACACCACGGTATCATTTAATGTAGGGGTGATTCTGGATTTGGGAACATTGGTAGGAAAGACGAGCAACAGCTGCCTTTCCATGGCCGTCTCAGACTTCTATGCCGTTCACGATGATTATAAGACGAGGCTAGTTCTTCACACCAGGGATTCCAAGAAGGATGTTGTTGCTGCTTTTTTTGAAGGAGAGGTGCAGTTAACAAACTTCACGAAGTTTGTTCTGAGCATTTGGAATGTTGTATTGTTGATTCTGAGTTCTTGTTACGTGGCTAGTTTAAATTCGAAACTAGCAGTTCAACATTTGCAACCTACTGTTACGGACATAGAAGATCTTATAAAGAACGGAGACTACGTGGGGTACCAGAAGGGGTCATTCGTGACGGGAGTCCTAAAGCGATTGAACTTCGATGAGTCCAAGCTCAGGGTCTATAACTCTCCAGAAGAGTATGATGAGGCCCTAACCAAAGGAAGTCGGAATGGTGGTGTTGCCGCCATAATGGATGAGATCCCATACATCATGCTTTTCTTGAAAAAGTATTGTAATAAATACGAAATGGTTGGACGGACCCACAGAATGGACGGATTTGGCTTTGTTTTCCAACGAGGATCCTCACTTGTGGCCGACGTTTCTAAGGCAATAACATCAGTACGAGAAGGAAAAATGGAGGAGATCGAGAAGCATTGGTTGGGGAGTCAAAGTAATTGTCAAGAACCAAGCAGTCCTATCTCTCCAAATAACACCCCCTCCTTCGAAATCTTTCGGGGGTTGTTCCTCGTCGCCGGAGCCGTCACAGTCATCACTCTGATACTTGGAACCATATTCAATCAAGAACAACACGGCACAAGGGATCAAGTTCCAGCACCACTCGACTCCATTGATGTTGTCCCGGCACCGACAGGCGACACCGCTACTAGTCCAGCAGTTGGCCACTCCATTAATGATGTTCCAGTGGCAGACGACAAGGCTAGTGTTCCAGCAGCAGACGACGCCACTTATGCCTCACCAAACATCCAATCAAATGATCCAGCAGCATGCGACACCACTGATGCCTCGCCAAACATTCAATCAACTGTTTTAGAATCTAGATGA 1185 0.4599 MKTPIPQSPFLFLLSYSLTICCIRAAARNGGINTTVSFNVGVILDLGTLVGKTSNSCLSMAVSDFYAVHDDYKTRLVLHTRDSKKDVVAAFFEGEVQLTNFTKFVLSIWNVVLLILSSCYVASLNSKLAVQHLQPTVTDIEDLIKNGDYVGYQKGSFVTGVLKRLNFDESKLRVYNSPEEYDEALTKGSRNGGVAAIMDEIPYIMLFLKKYCNKYEMVGRTHRMDGFGFVFQRGSSLVADVSKAITSVREGKMEEIEKHWLGSQSNCQEPSSPISPNNTPSFEIFRGLFLVAGAVTVITLILGTIFNQEQHGTRDQVPAPLDSIDVVPAPTGDTATSPAVGHSINDVPVADDKASVPAADDATYASPNIQSNDPAACDTTDASPNIQSTVLESR* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g01093 394 Pfam Bacterial extracellular solute-binding proteins, family 3 127 262 IPR001638 -
Eupl09g01093 394 SMART GluR_14 85 263 IPR001320 GO:0015276|GO:0016020
Eupl09g01093 394 Pfam Ligand-gated ion channel 100 294 IPR001320 GO:0015276|GO:0016020
Eupl09g01093 394 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 62 310 IPR015683 -
Eupl09g01093 394 FunFam Glutamate receptor 179 227 - -
Eupl09g01093 394 Gene3D - 119 223 - -
Eupl09g01093 394 MobiDBLite consensus disorder prediction 364 394 - -
Eupl09g01093 394 SUPERFAMILY Periplasmic binding protein-like II 117 266 - -
Eupl09g01093 394 MobiDBLite consensus disorder prediction 314 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g01093 Eupl-Chr9 21870128 21876950 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g01093 101 318 Ion Channels AT5G11210 41.892 1.02e-50 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g01093 K05387 - msin:131217636 241.506