Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g01092 ATGAAGAGCCCAATACTCGTCTCCTTTTCCTTCTGTTTCTGTATCATACTTGATCAAATATGGGGTCTCAGAACCCCAGTACCGTTTCATGTGGGGGTAGTTCTTGACATGGATTCATGGTTGGGGAAGGTTACCAACAGCTGCATGTCTATGGCACTCTCTGATTTCTACAGCAATCATACCAACTACAGAACGAGGCTGGTTCTCCACACCAGGGATTCGCAAATGGACGTTATTGGTGCTGCATCTGCAGGAGAGAAGCAGACTGGAATCTTGTATAGGTTCTTGGTGATCATATGGTTGAGTGTAGTGCTCATATTTACGTCAAGTTACGCAGCTAACTTAACATCGATGCTAACAATACAAAACTTTCGACCAGCCATAACAGACTTCAAAGATCTCATAAAGAATGGAGATTTTGTAGGTTACCGCAAAGGCTCCTTTGTGTTGGAGCTCCTAAAGCGATTGAACTTTGATGAGTCCAAGTTAAAGGACTACAACTCTCCCGAAGAATGCCATGAGGCGTTGTCAAAAGGAAGTCAGAATGGTGGTGTAGCTGCAGTCTTTGATGAGAAACCTTACATTAATGTCTTCCTTGCAAAATATTGTTCTACATACACCATTGTTGGACCTATACACAAGACTGACGGATTTGGCTTCGTTTTTCCAAGAGGTTCCCCTCTTTTGGCTGACATTTCCAAGGCAGTATTAAATGTGACTGAGGGAGACAAATTGGTGGAGATTGAACAAGCATGGTTTGGGCGTCAAACCACTTGTGACGATGACCAAAGAACCATTTTCACTTCAAACAATTTTTGGAGCCTCTTCCTTATCACTGGTACCATTGCAATACTTTCTCTTATTATAGTCTCAACCAATTTCTCTCACAAGGGTAAGTGTAGTCCGATTACGGTGGACTCTACAAAATCCAACAGTCTGGACCACTTTGATCAGAGAGATCTCTCTTATCCTACTTCTAAGAAGATTGAAGCAGACGAAGGACAAACGACGTGTGAAAAAACAGCTAAAGCTTTATCACACCTCAATGCTTCACAAAGTACATCAAGCACGTCCAACTACGATCTCTCTTATCCTACTTCTAAGAAGATTGAAGCAGACGAAGGACAAACGACATGTGAAAAAAAAGCTAAAGCTTTATCACACCTCAATGCTTCACAAAGTTCATCAAACCCGTCCAACTATATGGATGGGAGTATTTTGCCCTCAGAAGTAGAAGGGATGCAGTTAATCAAGCCTGACGGTTGA 1266 0.4218 MKSPILVSFSFCFCIILDQIWGLRTPVPFHVGVVLDMDSWLGKVTNSCMSMALSDFYSNHTNYRTRLVLHTRDSQMDVIGAASAGEKQTGILYRFLVIIWLSVVLIFTSSYAANLTSMLTIQNFRPAITDFKDLIKNGDFVGYRKGSFVLELLKRLNFDESKLKDYNSPEECHEALSKGSQNGGVAAVFDEKPYINVFLAKYCSTYTIVGPIHKTDGFGFVFPRGSPLLADISKAVLNVTEGDKLVEIEQAWFGRQTTCDDDQRTIFTSNNFWSLFLITGTIAILSLIIVSTNFSHKGKCSPITVDSTKSNSLDHFDQRDLSYPTSKKIEADEGQTTCEKTAKALSHLNASQSTSSTSNYDLSYPTSKKIEADEGQTTCEKKAKALSHLNASQSSSNPSNYMDGSILPSEVEGMQLIKPDG* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g01092 421 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 59 338 IPR015683 -
Eupl09g01092 421 Pfam Bacterial extracellular solute-binding proteins, family 3 105 254 IPR001638 -
Eupl09g01092 421 FunFam Glutamate receptor 2.7 161 261 - -
Eupl09g01092 421 MobiDBLite consensus disorder prediction 388 421 - -
Eupl09g01092 421 Pfam Ligand-gated ion channel 84 280 IPR001320 GO:0015276|GO:0016020
Eupl09g01092 421 Gene3D - 157 255 - -
Eupl09g01092 421 SUPERFAMILY Periplasmic binding protein-like II 105 259 - -
Eupl09g01092 421 Gene3D - 4 156 - -
Eupl09g01092 421 MobiDBLite consensus disorder prediction 388 404 - -
Eupl09g01092 421 SMART GluR_14 60 255 IPR001320 GO:0015276|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g01092 Eupl-Chr9 21860353 21864656 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g01092 94 290 Ion Channels AT5G11210 48.756 4.77e-59 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g01092 K05387 - msin:131217633 283.108