Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g01091 ATGTGGATCTTCTTCAAGCCTATGAATTGGGATCTTTGGCTTCTAAGCGGTGTATCCTTCATCTTCATTAACATAGTGATTTGGGTCTTCGAATATGTGAGAAACCCAAATTCTGGTGGACCTCCTACTCTGAAGATTGTCATGAACCTCTTTATTCCATCCCCAACCCTCATCTTCACACAAGGAGAGGAAGAGTTAACAACCCTGTCGAAGTTTATTCTGAGCACATGGAGTGTAGTAATTTGGATTCTGGGTGCTTGTTACATGGCAAGCTTAACATCAACTCTAACAGTTCAAAGTCTCCAACTTACTGCTCCAGAAGTAAAAGATCTTATAAAGAACGGAGACTATGTGGGCTACCAGAAGGGGTCCTTCGTAGCAGGACTCCTAAAGCAATTGAACTTCGATGAGTCCAAGCTCCGGGTCTATAATTCTCTGGAAGAGTATGATGAGGCCTTAACCAAAGGAAGTAAGAATGGTGGTGTTGCTGCCATTATGGATGAGATTACATACATCAAGCTCATGTTGAAGAAGTACTGCAATAAATACACTATGGTTGGACCAACCCACAGGATGGACGGATTTGCCTTTGTTTTTCAAAGAGGCTCCCCTCTGGTGGCCGACGTTTCAAGGGCAATATTATCTGTACTAGAAGCAGAAAAAATGGTGGAGATCGAGAAGAGATGGTTGGGGCGTGAAAGTACTTGTCTGGAGCCAAGCAACACTGTCTCCTCCAACAACCTCTCCCTCAACACGTTTTTGGTGCTATTCCTTATCCCAGGAAGTGTCACACTTTTTGCTCTTATACTATTCATTCTAGCTTACAAACACAGGCATTCAAATAAACGATTTTGGAAAGGCGCCGGAGCCATTTGTGGATTGAATCAGGAACAATTCACCCCAAGTAATGAAGGACTTGAAATGGTAACTCAATCAGGAACAGTTCCTACAAGTACTGAAGAATTTGAAAACGAAACTTCGGAGGAGACGGTAAGAGCTACAACAGCTAAGGAAAGCCAAGAAGAAGATGAACTCCCAGAGTCCTCCAATGATATCTCTGAAACCAAGTCAAAACTATTTAGAAGATATGCATCTACAAAAGACTCATCTCATAAGGATGTGATTATGGAGATATAG 1137 0.4222 MWIFFKPMNWDLWLLSGVSFIFINIVIWVFEYVRNPNSGGPPTLKIVMNLFIPSPTLIFTQGEEELTTLSKFILSTWSVVIWILGACYMASLTSTLTVQSLQLTAPEVKDLIKNGDYVGYQKGSFVAGLLKQLNFDESKLRVYNSLEEYDEALTKGSKNGGVAAIMDEITYIKLMLKKYCNKYTMVGPTHRMDGFAFVFQRGSPLVADVSRAILSVLEAEKMVEIEKRWLGRESTCLEPSNTVSSNNLSLNTFLVLFLIPGSVTLFALILFILAYKHRHSNKRFWKGAGAICGLNQEQFTPSNEGLEMVTQSGTVPTSTEEFENETSEETVRATTAKESQEEDELPESSNDISETKSKLFRRYASTKDSSHKDVIMEI* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g01091 378 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 1 324 IPR015683 -
Eupl09g01091 378 FunFam Glutamate receptor 2.7 138 238 - -
Eupl09g01091 378 Pfam Bacterial extracellular solute-binding proteins, family 3 104 231 IPR001638 -
Eupl09g01091 378 SUPERFAMILY Periplasmic binding protein-like II 88 236 - -
Eupl09g01091 378 Gene3D - 1 140 - -
Eupl09g01091 378 SMART GluR_14 43 232 IPR001320 GO:0015276|GO:0016020
Eupl09g01091 378 Pfam Ligand-gated ion channel 10 259 IPR001320 GO:0015276|GO:0016020
Eupl09g01091 378 MobiDBLite consensus disorder prediction 325 356 - -
Eupl09g01091 378 MobiDBLite consensus disorder prediction 311 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g01091 Eupl-Chr9 21854411 21856155 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g01091 2 280 Ion Channels AT2G29100 41.993 2.08e-67 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g01091 K05387 - nnu:104606995 293.893