Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g01090 ATGAAGAACTCAACCCAACTTCTTTCTTCCTTTTTCTTCGTATTCTCTCTGAGATATTTCTTCCTCTGTGAATTAGCCATGGCTCAAAACACAACCCTCACGATGAATGTTGGTGTGGTTCTTGATTTTGATAGATTGGTTGGGAAAGTAGGAATGAGCTGTATTTCCATGGCACTTTCCGACTTCTATGCTACTCACAGTTCGTACAAGACTAGGCTGGTTCTTCACACTAGGGACTCCAAGAAAGATATCGTCGGAGCCGCATCTGCAGGTTTAATTTCACCAAAGAACTCTCTTACTGAAGCTTGTTTCCGTGTGACCGGAAACATCTTTGACTCACAATGGCTGTGTTGGCCAAAAATCATCGACAACTCGAGCGACCTTGCAACATTGGGTGTTTCTGTGATAGGTCCTAGACTTCTGCAAGCAATTTTAATGACTGATTTTAAAGGCCTGAGTGGGGAATTCCATCTTGTTAATGGACAATTACAATCATCCATCTTCCAGATACTCAATGTGATTGGTAATGGGGGGAGAGAGATTGGTTTTTGGACACCAACAAATGGAATTGTGCGAGGACTGAATAAATATGATGCTGTGGTTGGAGATACAACGATCATAGCCAATCGATCCCAGTATGTAGATTTTACATTACCATATACGGAGTCTGGGGTATCGATGATCGCACCAGTCAAAGATGATCGAAACAATGCGTGGATTTTCTTGAAACCTTTGACTAGGGATCTTTGGCTAACAAGTGCTGCATTCTTTATCTTCACGGGTATAGTAATTTGGTTTCTGGAACACCAGATAAATGATGATTTCAGAGGGCCACCTTCCCATCAGCTTGGCATGATCTTCTGGTTCTCCTTATCGACGCTCGTTTTTGCACATAGGGAGAAGGTGGTGAGCAACTTGACTAGGTTTGTGGTGATCATATGGGTTTTCGTTGTGCTCATACTCACTTCCAGTTACACAGCAAGCTTAACATCAATGTTGACAGTTCAGAAACTCCAACCGACGGTCACTGATGTCAAAGAGCTCATAAAGAATGGGGAAAAGGTTGGCTATCAGCAAGGTTCATTTGTGTTGGGGTTTTTGAAGCGAATGAACTTTTCGGAGTCCAATCTCAAGGTTTATAACTCTCCAGATGAGTTCGATGAAGCTTTATCAAAAGGAAGTCAGAACGGTGGTATTGCTGCAGCTTTTGATGAGATTCCGTACATCAAGCTCCTCCTCGCAAGATACTGTGCAAAATACACCATGGTCGGAGCTACATATAAGACAGATGGATTTGGCTTTGTCTTCCCAAGAGGTTCTCCTTTAGTAGCAGATATTTCGAGGGCAATTCTAAATGTAACAGAGGGAGAAAGAATGGTAGAGATTGAGCAAGCATGGTTCGGGCATCAAACAAGTTGTCCAGACCCAAACACCTTGGTCTCTTCAAATAGTCTCACTCTTGATAGCTTTTGGGGCCTTTTCCTCATTGCAGGAGTTTCTTCAATCTCAGCCCTACTCATATTCTTGGTTATTTTCTTTTACAAGAATAGGAATATCTGGAGGCACACTGATCCTGAAACAACCATTTGGGAAAAAATTGTCATCATAGTGAGACGCTTTGATCAAAGGGACCTTACCTGTCATACTTTCAGGAGAAAGAATATTAGTACCCCCGAGAGGCCTAATGGTGTTTAA 1695 0.423 MKNSTQLLSSFFFVFSLRYFFLCELAMAQNTTLTMNVGVVLDFDRLVGKVGMSCISMALSDFYATHSSYKTRLVLHTRDSKKDIVGAASAGLISPKNSLTEACFRVTGNIFDSQWLCWPKIIDNSSDLATLGVSVIGPRLLQAILMTDFKGLSGEFHLVNGQLQSSIFQILNVIGNGGREIGFWTPTNGIVRGLNKYDAVVGDTTIIANRSQYVDFTLPYTESGVSMIAPVKDDRNNAWIFLKPLTRDLWLTSAAFFIFTGIVIWFLEHQINDDFRGPPSHQLGMIFWFSLSTLVFAHREKVVSNLTRFVVIIWVFVVLILTSSYTASLTSMLTVQKLQPTVTDVKELIKNGEKVGYQQGSFVLGFLKRMNFSESNLKVYNSPDEFDEALSKGSQNGGIAAAFDEIPYIKLLLARYCAKYTMVGATYKTDGFGFVFPRGSPLVADISRAILNVTEGERMVEIEQAWFGHQTSCPDPNTLVSSNSLTLDSFWGLFLIAGVSSISALLIFLVIFFYKNRNIWRHTDPETTIWEKIVIIVRRFDQRDLTCHTFRRKNISTPERPNGV* 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g01090 564 Gene3D - 187 238 - -
Eupl09g01090 564 Gene3D - 137 165 - -
Eupl09g01090 564 SUPERFAMILY Periplasmic binding protein-like II 195 469 - -
Eupl09g01090 564 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 188 525 IPR015683 -
Eupl09g01090 564 Gene3D - 166 186 - -
Eupl09g01090 564 SMART GluR_14 130 469 IPR001320 GO:0015276|GO:0016020
Eupl09g01090 564 FunFam Glutamate receptor 2.7 375 475 - -
Eupl09g01090 564 FunFam Glutamate receptor 238 363 - -
Eupl09g01090 564 Pfam Ligand-gated ion channel 470 499 IPR001320 GO:0015276|GO:0016020
Eupl09g01090 564 Gene3D - 415 475 - -
Eupl09g01090 564 CDD GluR_Plant 194 467 - -
Eupl09g01090 564 Pfam Bacterial extracellular solute-binding proteins, family 3 195 469 IPR001638 -
Eupl09g01090 564 Gene3D - 239 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g01090 Eupl-Chr9 21837616 21843988 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g01090 198 558 Ion Channels AT2G29110 57.609 1.19e-135 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g01090 K05387 - nnu:104586704 549.28