Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g01088 ATGGCAGCTATTTTCCAACTCTTCTCCTTCTTCTTCTTCTTCTTCTTCTTCGTCTTCTTTGTTGTTTTCGTCCATATTGTATCAGGCATGACCACCGACGGAGAAGCTCTACTGTCGCTCCTCAACAACTTGAACACACCTCCCTCCATCAAATCGAGCTGGAACTCGTCTGATTCCACTCCTTGTTACTGGCAAGGAATCCAATGCGACCATAAACACAACGTAATTTCTCTGAACCTCTCCGGTTTTGAGTTTTCCGGTCAATTGGGTCCTTCAATTGGACGGTTAAGATACCTCCAGACAATTGATCTTGCCGTCAACAATCTTTCCGGTACAATCCCATCTGAGTTAGGGAATTGCAGTAGTCTCAAACACTTGGACCTTTCCTCGAACGGATTCACTGGAAAAATACCCGAAACCCTGAAAAACTTGCAAAAACTGAGCACTTTCTCGGTTTTCAGTAATTCCCTCAGTGGAGGGATACCAGAGTCCTTGTTTCAGATTCCACATTTGGAATTTGTTTTCCTCAGTTCAAATAAATTCACTGGTTCGATCCCGTCTAGCGTAGCCAACATGACTGAGATTACGTCTCTGTGGTTGGATGATAATCAGTTATCAGGGGTAATTCCCTTTTCTATTGGAAATTGCACTAAATTGGTACAACTTTATTTGAACAATAACACGTTTACTGGGGTTTTGCCAGAGAGTTTGAACCATCTCGATAACCTTGCTTACTTGGATGTAAGTTCGAACTGTTTAGAGGGTAGGATTCGATTGGGTTTGGGGAGTTGGAGTTGCAAGAAATTGAATGAGTTGGTTTTGTCTTTCAACCGTTTTAATGGAGAAATTCCGTCGGGCTTGGGCAATTGCAGTGGTTTAACGGCATTCGCGGCTGTGAGCAATAGTTTAACGGGCCGAATCCCATCTTCCCTTGGCTTACTAAGTGATCTTTCGATTCTTTACCTTTCTCAAAACCGTTTGTCTGGGAAAATTCCGTCTGAGATCGGGAAATGTAGGTCGTTGACAAGTTTGGTGTTACATGAAAATCAGCTTGAAGGGGAAATTCCGAGTGAATTGGGGATGTTGAGTAATTTGCAGACCCTTCAGTTGTTTATCAACAATTTCACTGGAGAGATTCCGTTAGAAATTTGGAAGATTCCAACCCTTGAGAATCTATATGTTTATAACAACAGTCTCTCAGGGGAACTACCTATGGAGATGACTGCGCTCCGTCGGTTAAAAAACATTTATCTCTTCAACAACCAGTTTTCCGGTGTCATACCCCAAACCTTAGGGATTAACAGTAGTTTGGTTCAGTTGGACTTCACCAACAATAGCTTTTCTGGTGAAATCCCACCAAATCTCTGCTTTGGAAAACAACTGAGGGTTCTGATTTTGGGTCTTAATCAACTTCAGGGTAGCATTCCTTCGGATGTTGGAAGCTGTTCGACTTTGAAAAGGTTGATTCTTAAACACAACAATCTCACTGGATTACTTCCCGAGTTTGCAAAAAACCCGAACCAGTTATTCATGGACTTCAGTTGGAACAACATAAATGGAACAATTCCATCAAGCTTGGGGAACTGTACCAATCTTACTTCAATTAACTTGTCTATGAATAAGCTCAAAGGTCCTATACCCCAAGTACTAGGAAACCTTGTCGAGTTGCAGGTTTTGAATCTCTCTAATAACCATTTGCAAGGTTCATTGCCTCCCCAAATCTCAAAGTGTAACAAATTATTTTCATTAGATTTGGGATTCAATTCGTTAAATGGTTCGATTCCATCGAGTCTAAGGAGCTTAACACAACTATCCACCTTGATACTGAGGGAAAATCAGTTCAGCGGGGGAATTCCTGATTTCTTGTCTGAATTTGAAAAGCTTTTAGAGCTTCAACTTGGGGATAATTCGTTTGGAGGTTATATCCCACCATCACTTGGAGAATTGCAGAACCTGGCCTATGCTTTGAATCTCAGTGGTAATGGTCTCACGGGCCAAATACCCTCAGAGTTGGTGAAATTGACTATGCTGCGAAGCTTGGATATATCTTGCAACAATCTGACAGGAAGTATAGCACTAATCGGCGAACTCCATTCGTTATTCGAGGTGAATGTTTCGAATAATCTCTTCTCCGGTCCAATACCGGGAGAATTGATGAAGTTGCTGAACTCCTCTCTATCTTCATTCTTGGGCAATGCAGGTCTCTGTATTCCTTGTCAGCTTGGGGGTGGCTGTGATCGGAACAGAAATTTCCGTCCTTGTGATAATCGATTGAGTGATCGAAAAGGCCACAGTAGAGATAAGATTGTGATGATAGCACTTGGATCATCGCTGTTCTGTGTTCCAGTGCTTTTCATGTTGGGCTATACGTTTCTGAGGTGCAGAAAACCAGAAAAGGAGGTTGAGGAGCCATCGTACCTATTGAACCAGGTGATAAAGGCCACTGAGAATCTGAATGAGAGATTTATGATTGGGAGAGGAGCCCATGGAACTGTTTACAAGGCATTGTTGGATTCAGGTGAACTGTATGCTGTAAAGAAAATTGTTTTTGCAAACCATAAAAGAGCAAGTGTAAGCATGGATAGAGAAATACGGACGGCTGGACAGATCAGACACCGGAATTTGGTGAGATTGCATGACTTCTGTTTCAGAAAGAGCTATGGTTTGATCTTGTACTGGTACATGAAGAATGGCAGCCTTCACGATGTTCTACATGAGATCAGTCCTGCCCCAGTTCTCAAGTGGGATATGCGTTATAGGATAGCACTGGGAACTGCCCAAGGATTAGCCTATCTTCATGAAGACTGTAATCCCGCTATCGTACACCAAGATATCAAACCAACGAACATACTTTTGGACTCGGAGATGGAGCCCCATATCTCTGACTTTGGCATTGCGAAGCTCATGGATCAGTCTTCTGCTTCAGTTCACTCCATTTCCGTTGTGGGGACCATTGGATATATTGCACCAGAGAATGCATTTAAAATGACGAAGAGCAAGGAATCAGATGTGTACAGCTATGGGGTAGTTTTGCTTGAACTAATAACCAGAAAGAAGGCCTTGGATCCTTTGTTTCTGGAGGGCATGAACATAGCGAGCTGGGCAAGCTCCGCCTGGAGCAGCACCAAATCCATCGATGGCATCGTGGATCCGGGCCTTGTGGATGAATTCATGGAGTCAGCAGTTGTGGAAGAAGTGACTGATGTACTCTTGGTGGCTTTGCAGTGTACAGCAAAGTTGCCAAGTGAGAGACCCGCAATGAGAGATGTAGTGAAGCGGCTAACAGATGCAAAGGCCCAAGTTAGAGCAAAGTGA 3315 0.4314 MAAIFQLFSFFFFFFFFVFFVVFVHIVSGMTTDGEALLSLLNNLNTPPSIKSSWNSSDSTPCYWQGIQCDHKHNVISLNLSGFEFSGQLGPSIGRLRYLQTIDLAVNNLSGTIPSELGNCSSLKHLDLSSNGFTGKIPETLKNLQKLSTFSVFSNSLSGGIPESLFQIPHLEFVFLSSNKFTGSIPSSVANMTEITSLWLDDNQLSGVIPFSIGNCTKLVQLYLNNNTFTGVLPESLNHLDNLAYLDVSSNCLEGRIRLGLGSWSCKKLNELVLSFNRFNGEIPSGLGNCSGLTAFAAVSNSLTGRIPSSLGLLSDLSILYLSQNRLSGKIPSEIGKCRSLTSLVLHENQLEGEIPSELGMLSNLQTLQLFINNFTGEIPLEIWKIPTLENLYVYNNSLSGELPMEMTALRRLKNIYLFNNQFSGVIPQTLGINSSLVQLDFTNNSFSGEIPPNLCFGKQLRVLILGLNQLQGSIPSDVGSCSTLKRLILKHNNLTGLLPEFAKNPNQLFMDFSWNNINGTIPSSLGNCTNLTSINLSMNKLKGPIPQVLGNLVELQVLNLSNNHLQGSLPPQISKCNKLFSLDLGFNSLNGSIPSSLRSLTQLSTLILRENQFSGGIPDFLSEFEKLLELQLGDNSFGGYIPPSLGELQNLAYALNLSGNGLTGQIPSELVKLTMLRSLDISCNNLTGSIALIGELHSLFEVNVSNNLFSGPIPGELMKLLNSSLSSFLGNAGLCIPCQLGGGCDRNRNFRPCDNRLSDRKGHSRDKIVMIALGSSLFCVPVLFMLGYTFLRCRKPEKEVEEPSYLLNQVIKATENLNERFMIGRGAHGTVYKALLDSGELYAVKKIVFANHKRASVSMDREIRTAGQIRHRNLVRLHDFCFRKSYGLILYWYMKNGSLHDVLHEISPAPVLKWDMRYRIALGTAQGLAYLHEDCNPAIVHQDIKPTNILLDSEMEPHISDFGIAKLMDQSSASVHSISVVGTIGYIAPENAFKMTKSKESDVYSYGVVLLELITRKKALDPLFLEGMNIASWASSAWSSTKSIDGIVDPGLVDEFMESAVVEEVTDVLLVALQCTAKLPSERPAMRDVVKRLTDAKAQVRAK* 1105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g01088 1104 Gene3D Ribonuclease Inhibitor 359 436 IPR032675 -
Eupl09g01088 1104 Pfam Leucine rich repeat N-terminal domain 32 70 IPR013210 -
Eupl09g01088 1104 Gene3D Phosphorylase Kinase; domain 1 793 894 - -
Eupl09g01088 1104 FunFam Serine/threonine-protein kinase-like protein CCR4 895 1104 - -
Eupl09g01088 1104 Gene3D Transferase(Phosphotransferase) domain 1 895 1104 - -
Eupl09g01088 1104 Pfam Leucine Rich Repeat 122 144 IPR001611 GO:0005515
Eupl09g01088 1104 SUPERFAMILY RNI-like 407 729 - -
Eupl09g01088 1104 SMART LRR_typ_2 192 215 IPR003591 -
Eupl09g01088 1104 SMART LRR_typ_2 553 577 IPR003591 -
Eupl09g01088 1104 SMART LRR_typ_2 601 625 IPR003591 -
Eupl09g01088 1104 SMART LRR_typ_2 674 697 IPR003591 -
Eupl09g01088 1104 SMART LRR_typ_2 216 239 IPR003591 -
Eupl09g01088 1104 SMART LRR_typ_2 314 338 IPR003591 -
Eupl09g01088 1104 SMART LRR_typ_2 96 120 IPR003591 -
Eupl09g01088 1104 Gene3D Ribonuclease Inhibitor 30 189 IPR032675 -
Eupl09g01088 1104 FunFam Leucine-rich repeat family protein 266 500 - -
Eupl09g01088 1104 Gene3D Ribonuclease Inhibitor 191 263 IPR032675 -
Eupl09g01088 1104 Gene3D Ribonuclease Inhibitor 264 358 IPR032675 -
Eupl09g01088 1104 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 188 265 - -
Eupl09g01088 1104 Pfam Protein kinase domain 823 1022 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl09g01088 1104 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 597 691 - -
Eupl09g01088 1104 SMART serkin_6 818 1101 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl09g01088 1104 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 510 598 - -
Eupl09g01088 1104 ProSitePatterns Serine/Threonine protein kinases active-site signature. 940 952 IPR008271 GO:0004672|GO:0006468
Eupl09g01088 1104 SUPERFAMILY RNI-like 77 430 - -
Eupl09g01088 1104 ProSiteProfiles Protein kinase domain profile. 818 1101 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl09g01088 1104 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 793 894 - -
Eupl09g01088 1104 SUPERFAMILY Protein kinase-like (PK-like) 804 1094 IPR011009 -
Eupl09g01088 1104 Pfam Leucine rich repeat 195 251 IPR001611 GO:0005515
Eupl09g01088 1104 Pfam Leucine rich repeat 516 566 IPR001611 GO:0005515
Eupl09g01088 1104 Gene3D Ribonuclease Inhibitor 437 742 IPR032675 -
Eupl09g01088 1104 FunFam LRR receptor-like serine/threonine-protein kinase FLS2 501 596 - -
Eupl09g01088 1104 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 29 187 - -
Eupl09g01088 1104 ProSitePatterns Protein kinases ATP-binding region signature. 824 847 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g01088 Eupl-Chr9 21783059 21787192 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g01088 47 1103 Receptor kinase-like Gene Family AT1G73080 53.724 0.0 1068
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Eupl09g01088 Pkinase 1.4e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g01088 - - nnu:104590065 1374.76