Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g01083 ATGTTCCCTTCAGATCCTGCTAAAATACTCATTGCCATCCCCTTAGATGTTCAAGTGAGCAAACAGCTCCTCTCATGGGCGATCGGCATTGCAGCTCGACCAAACGACACTGTCGTCGCGTTACATGTTCTTGTGGAGTCGTCGAAAAAGCTTGAATCTACTAAGTTCAACAAGACCCAATTTCGTAGAGCGAAAGCGTTTGTTATTTCGGTGCTTGGTGAATTCGCCGAAATCTGCCGAGATAAGCAGGTGAACTTAGAGGCCAGAGTAGGAAGTAGTTCAAGTATTGGCAGAGGTCTAATTGATGAAGCAGCATCCATTGAAGCTTCCTTCCTTCTTGTTGGTGGCTCAAGGAACCGAAACCGATCACATAGAAGTTCACTTGAAATTACCAAGTACTGCTTCGAGTATGCTCCGGAGGGTTGTTCTGTCGTCTCAATCGGAATCCGCGGGCAGCCCCACAAAGATTCAGACTCGGAGGTTGCGAGTTTTGAAGAATTACGACAATCAAGTTCAAGACGGTCCGACAAGGATGTTCATGTTGGTAAGGCTATGTCCTCCCTACAGAAGCTTTTTGTTCCGAAGATATGGAGAGAGAATTCGGTTAATAAGAGTAAGAATCAAAGCAACCGGCATTCCCCGACTCGAAGCAGCTGTGAGAAGCCTTCACCTAGAGCTGTTCTTGACGGACCCGAAGGAGGATCACATGGCATAGAAGAAGATTACCTTAGTCTTGGGGACTCAAGCATCACAGAGTCCCCTCCTTCTCAGGCGTTGAAATATCAGGGCCGCTCCAACACATGGAAGCACTTATCAATAATTAAGCTCTTATTTCCTTTCCTCACCTCCTCATCCCATGGATCAGCAAGGGAGAGAAGTGAAGGCTTCTCCGACAAAGAAAACCGACAGCCTTCATGGAGGTGCTTCAGCTATGAGGAGATTTCGATTGCAACAAATAATTTCCACCCAGATAATATGGTGGGACAAGGAGGATATGCAGAAGTATATCGAGGCGATCTCTACGATGGAAGAATTATAGCGGTGAAGAGACTAGCGAAGGACAACAGCGATGAAAATAAGCAGAAAGAATTTCTCATGGAATTGGGTATAATAGGCCATGTCTGTCATCCTAACACAGCATGCTTGATTGGCTGCTGCTTTGAAAATGGGCTCCATCTGATCTTCAATTTCTCTCCAAATGGAAACTTGTCGTCGGCATTACATGGTAAGACCTGCAAGTCACTCGAGTGGCCTGTTCGATACAACATTATCATTGGAGTTGCCAGGGGTTTGCATTATCTTCATAAATGTTGCAAACGACGGATAATTCATCGCGACATAAAGGCCTCTAATGTACTTCTTGGGCAAGATTTCGAACCACAGATTTCAGATTTTGGACTTGCAAAATGGCTTCCAAACCAATGGACTCATCACTCTGTCATTCCAATTGAGGGTACATTCGGTTACTTAGCGCCGGAGTACTTCATGCATGGAATCGTGGATGAGAAGACCGATGTTTTCGCATTTGGTGTTCTTCTTTTGGAAATCATAACCGGCCGGAGGCCTGTCGATTCGTCAAAGCAGAGCCTTCTCTTTTGGGCGAAGCCGCTTATAGAGTCGGGAGACATCGTCGAACTAGCAGATCCAAAACTTCAAGGTAAATACGATACGAATCAGATGCACAGAGTAGTTCTCACAGCTTCATACTGCGTAAGACAATCATCATTATGGCGTCCATCAATGAGTGAGGTGTTGCAGCTACTAAACGACGGGCATGACTCCGAGGTTGCGCAGAGCTGGAGGATGCCGGAGTGTACGATTGATGAGATGGATGATTACACGCTGGATGTCAATAGACAGTTTATAACAAATCAAAATTTGCAATGTGATTAG 1893 0.4548 MFPSDPAKILIAIPLDVQVSKQLLSWAIGIAARPNDTVVALHVLVESSKKLESTKFNKTQFRRAKAFVISVLGEFAEICRDKQVNLEARVGSSSSIGRGLIDEAASIEASFLLVGGSRNRNRSHRSSLEITKYCFEYAPEGCSVVSIGIRGQPHKDSDSEVASFEELRQSSSRRSDKDVHVGKAMSSLQKLFVPKIWRENSVNKSKNQSNRHSPTRSSCEKPSPRAVLDGPEGGSHGIEEDYLSLGDSSITESPPSQALKYQGRSNTWKHLSIIKLLFPFLTSSSHGSARERSEGFSDKENRQPSWRCFSYEEISIATNNFHPDNMVGQGGYAEVYRGDLYDGRIIAVKRLAKDNSDENKQKEFLMELGIIGHVCHPNTACLIGCCFENGLHLIFNFSPNGNLSSALHGKTCKSLEWPVRYNIIIGVARGLHYLHKCCKRRIIHRDIKASNVLLGQDFEPQISDFGLAKWLPNQWTHHSVIPIEGTFGYLAPEYFMHGIVDEKTDVFAFGVLLLEIITGRRPVDSSKQSLLFWAKPLIESGDIVELADPKLQGKYDTNQMHRVVLTASYCVRQSSLWRPSMSEVLQLLNDGHDSEVAQSWRMPECTIDEMDDYTLDVNRQFITNQNLQCD* 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g01083 630 CDD USP_Like 8 145 - -
Eupl09g01083 630 Gene3D Transferase(Phosphotransferase) domain 1 399 607 - -
Eupl09g01083 630 PANTHER OS08G0249100 PROTEIN 56 610 IPR046958 -
Eupl09g01083 630 Gene3D Phosphorylase Kinase; domain 1 292 397 - -
Eupl09g01083 630 FunFam Putative receptor-like serine/threonine-protein kinase 399 614 - -
Eupl09g01083 630 SMART serkin_6 321 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl09g01083 630 MobiDBLite consensus disorder prediction 202 220 - -
Eupl09g01083 630 FunFam Putative receptor-like serine/threonine-protein kinase 288 397 - -
Eupl09g01083 630 SUPERFAMILY Protein kinase-like (PK-like) 299 588 IPR011009 -
Eupl09g01083 630 Gene3D HUPs 4 147 IPR014729 -
Eupl09g01083 630 ProSiteProfiles Protein kinase domain profile. 321 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl09g01083 630 Pfam Protein tyrosine and serine/threonine kinase 325 586 IPR001245 GO:0004672|GO:0006468
Eupl09g01083 630 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 7 122 - -
Eupl09g01083 630 ProSitePatterns Protein kinases ATP-binding region signature. 327 349 IPR017441 GO:0005524
Eupl09g01083 630 MobiDBLite consensus disorder prediction 202 241 - -
Eupl09g01083 630 Pfam Universal stress protein family 9 139 IPR006016 -
Eupl09g01083 630 ProSitePatterns Serine/Threonine protein kinases active-site signature. 442 454 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g01083 Eupl-Chr9 21701415 21704798 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g01083 247 598 Receptor kinase-like Gene Family AT1G53420 41.209 1.12e-73 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Eupl09g01083 PK_Tyr_Ser-Thr 4.7e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g01083 - - nnu:104590072 870.537