Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g01077 ATGAGACCGATGCAATCCCCAGCGCCCACCACCAACACCAGTCGTCCTCGACGGAGGCCTGACCTAACCCTTCCTCTTCCCCAACGCGATCCATCTCTAGCTGTTCCTCTTCCTCTCCCACCCGCCCCTGTTATCTCATCCTCTTCCTCCTCCTCTCAACAACCGGCTTATCAGACACCGTTGGGTTTCGATGAGCTCGATAGAGAACGCCGAGTCGGCAGCGGCAGCGGTGGTACTGTCTACAAAGTACGACACCGCCCCACCAAAAAAGCTTATGCGCTCAAGGTGATCTACGGTAATCACGATGATTCCGTCCGTCGTCAGATCTGCCGCGAGATCGAGATCCTCCGCGCTGTCGATAACCCTAACGTGGTTAAGTGCCATGGCATGTTTGATAACGCCGGCGAGATCCAGGTTCTCCTTGAGTACATGGATGGTGGATCACTCGCGGGGACCCATATCCCCCGTGAACCCGCTCTTGCTGATTTTGCCCGTCAGATCCTCTCCGGTCTCGCCTATTTGCACCGCCACAGGATCGTCCACCGCGATATCAAACCCTCTAATCTCCTCATCAACGATCACAGACAGGTGAAGATTGCTGACTTTGGGGTCAGCAGGATCCTCGCCCAGACCATGGATTGCAATTCATCAGTTGGGACCATCGCTTACATGAGCCCTGAGCGTATCAACACCGATCTCAATCACGGTGCATACGACGGATACGCCGGAGATATATGGAGTCTGGGTGTGAGCATATTGGAATTTTATTTGGGGAGATTTCCGTTCGCTGTCGGTCGGCAGGGAGATTGGGCAAGTCTGATGTGTGCAATTTGTATTTCGGCGCCACCGGAAGCCCCGGCATCTGCGTCGATAGAGTTTCGCCATTTCGTGTCGTGTTGTTTGCAGAGAGAGCCGGCGAGGCGGTGGACCGCAGCGAAGCTGCTGACTCATCCCTTCATTACTCAGAACAATAACCACAACATGCCGAGTCAAGTTCATCCTCATCAACAACTCTTCCTCCCCCCTCAACATTCTTCCTCCTCCCACGGCTGA 1053 0.5451 MRPMQSPAPTTNTSRPRRRPDLTLPLPQRDPSLAVPLPLPPAPVISSSSSSSQQPAYQTPLGFDELDRERRVGSGSGGTVYKVRHRPTKKAYALKVIYGNHDDSVRRQICREIEILRAVDNPNVVKCHGMFDNAGEIQVLLEYMDGGSLAGTHIPREPALADFARQILSGLAYLHRHRIVHRDIKPSNLLINDHRQVKIADFGVSRILAQTMDCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFAVGRQGDWASLMCAICISAPPEAPASASIEFRHFVSCCLQREPARRWTAAKLLTHPFITQNNNHNMPSQVHPHQQLFLPPQHSSSSHG* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g01077 350 MobiDBLite consensus disorder prediction 1 63 - -
Eupl09g01077 350 MobiDBLite consensus disorder prediction 1 18 - -
Eupl09g01077 350 FunFam Mitogen-activated protein kinase 2 146 332 - -
Eupl09g01077 350 ProSitePatterns Serine/Threonine protein kinases active-site signature. 179 191 IPR008271 GO:0004672|GO:0006468
Eupl09g01077 350 Gene3D Phosphorylase Kinase; domain 1 45 145 - -
Eupl09g01077 350 Gene3D Transferase(Phosphotransferase) domain 1 149 348 - -
Eupl09g01077 350 ProSiteProfiles Protein kinase domain profile. 66 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl09g01077 350 MobiDBLite consensus disorder prediction 325 350 - -
Eupl09g01077 350 Pfam Protein kinase domain 68 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl09g01077 350 ProSitePatterns Protein kinases ATP-binding region signature. 72 95 IPR017441 GO:0005524
Eupl09g01077 350 SUPERFAMILY Protein kinase-like (PK-like) 64 344 IPR011009 -
Eupl09g01077 350 SMART serkin_6 66 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl09g01077 350 MobiDBLite consensus disorder prediction 44 59 - -
Eupl09g01077 350 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 17 324 - -
Eupl09g01077 350 CDD PKc_MAPKK_plant_like 64 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g01077 Eupl-Chr9 21605319 21607002 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g01077 1 320 MAP Kinase Kinase Gene Family AT1G51660 71.557 2.17e-166 467
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Eupl09g01077 Pkinase 1.3e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g01077 K13413 - ming:122084522 478.404