Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g01073 ATGGGGGTGAAACAAGGACATGGAATGTCCAAAAAAATTGTGCCTTCAGTTGAACAGGATATTTCTGATGAGTTGGATGTGAAAGTCAAGAAGTATCTCCGTGGTGATAGTGCTAATTTGGAGGTTTTACAAGATAAAAAGCTGAGAGGCCAACTTGCGGTTAGAGAAGAATTATATGGCAAATCTGCAAAAGCTGCTGCCAAGGCTGAAAAGTGGCTTATGCCAAGTGAGGAAGGCTATTTGGAGGCTGAAGGCTTAGAGAAGACATGGAGGATTAAGCAGGAATCAATTATTCGTGAAGTAGATATTCTGAGCTCGAGGAAGCCATTTGATATAGTCTTACCAGAGCTAGGTCCGTACACACTGGACTATACCTCAAGTGGTCGTTATATGGCAGTTGCAGGACGCAAGGGCCACCTGGCAATCATAGACATGAAAAATATGGGCCTAATTAAAGAGTTTCAGGTCAGGGAAACAGTGCGTGATGTGGTGTTCTTGCACAATGAACTATTTTTTGCTGCGGCCCAGAAAAAGTATCCATATATTTATAACAGGGATGGTACAGAACTTCACTGCCTTAAGGAACATGGGGCAGCAGTAAAGCTTCAATTTCTGAAAAACCACTTCCTCTTGGCATCCATTAACAAATTTGGGCAGCTTCATTACCAAGATGTGACTATGGGTGAGATGGTTGGAAATTATCGGACCGGTCTTGGCCGTTGTGATGTAATGCAGGTGAATCCCTTCAATGCTGTTCTCGGTTTGGGTCACTCCTGCGGCAAAGTCACCATGTGGAAGCCCACAAGCTCTGCTCCCCTCGTCAAGATGCTGTGTCATAATGGTCCCACATTGGCGATGGCCTTCCACCCTGGAGGTCATCTAATGGCCACGGCAGGCATGGAGAGGAAGATCAAGCTGTGGGATTTGAGGAAATTTGAGGTTCTACAAACATACCCAGGCCATGCTAAGACCTTGGAGTTCAGTCAGAAGGGTTTGCTTGCTATTGGAAACGGATCCCTCGTACAGATATGGAGAGATTCCTCTGGAAGTCAGGACTATAGCCGGTACATGAGTCATTCAATGGCGAAAGGTTATCAAGTGGGAAAAGTGTCGTTCCAATCCTACGAGGATGTTTTGGGCCTTGGACACTCCATGGGCATATCTTGTATTCTTGTTCCAGGATCTGGAGAACCCAACTTTGATTCTTGGGTGGCAAACCCCTTTGAAACTTCTCAACAGCGGAGGGAGAAGGAGGTGAACTCTCTTCTTGATAAGCTACCACCAGAAACAATCATGCTGGACCCCACGAAGATAGGTAATATGAGACCAGCGAAGAAGAAAGAACAGCCGACTAAGCAGGAGAGAGAGACCGAGATGGAAGCTGCAATTACAGCTGTCAAGAGCGTTCCTTTTAAGAAGAAAACAAAAGGGAGGAATAAGCCAAGTAAAGTGGAGAAGAAGAAGCAGCAGGGTATTGTGAGAGCCAAGAGGCCTTTCTTGGACCAACAAATGAGGGAGGAACAACAATTATCAAAGAAAAAACAGAGAATAAGCGAGGAAACTCAGTTACCAAAATCTCTCCAGCGATTTGCTCGCAAGAAGGCGCCATGA 1611 0.455 MGVKQGHGMSKKIVPSVEQDISDELDVKVKKYLRGDSANLEVLQDKKLRGQLAVREELYGKSAKAAAKAEKWLMPSEEGYLEAEGLEKTWRIKQESIIREVDILSSRKPFDIVLPELGPYTLDYTSSGRYMAVAGRKGHLAIIDMKNMGLIKEFQVRETVRDVVFLHNELFFAAAQKKYPYIYNRDGTELHCLKEHGAAVKLQFLKNHFLLASINKFGQLHYQDVTMGEMVGNYRTGLGRCDVMQVNPFNAVLGLGHSCGKVTMWKPTSSAPLVKMLCHNGPTLAMAFHPGGHLMATAGMERKIKLWDLRKFEVLQTYPGHAKTLEFSQKGLLAIGNGSLVQIWRDSSGSQDYSRYMSHSMAKGYQVGKVSFQSYEDVLGLGHSMGISCILVPGSGEPNFDSWVANPFETSQQRREKEVNSLLDKLPPETIMLDPTKIGNMRPAKKKEQPTKQERETEMEAAITAVKSVPFKKKTKGRNKPSKVEKKKQQGIVRAKRPFLDQQMREEQQLSKKKQRISEETQLPKSLQRFARKKAP* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g01073 536 MobiDBLite consensus disorder prediction 484 520 - -
Eupl09g01073 536 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 276 310 - -
Eupl09g01073 536 PANTHER WD-REPEAT PROTEIN BING4 10 532 IPR040315 -
Eupl09g01073 536 SUPERFAMILY WD40 repeat-like 118 353 IPR036322 GO:0005515
Eupl09g01073 536 Pfam BING4CT (NUC141) domain 356 434 IPR012952 -
Eupl09g01073 536 MobiDBLite consensus disorder prediction 440 458 - -
Eupl09g01073 536 ProSiteProfiles Trp-Asp (WD) repeats profile. 276 317 IPR001680 GO:0005515
Eupl09g01073 536 SMART WD40_4 147 184 IPR001680 GO:0005515
Eupl09g01073 536 SMART WD40_4 105 144 IPR001680 GO:0005515
Eupl09g01073 536 SMART WD40_4 269 308 IPR001680 GO:0005515
Eupl09g01073 536 SMART WD40_4 311 345 IPR001680 GO:0005515
Eupl09g01073 536 Gene3D - 120 391 IPR015943 GO:0005515
Eupl09g01073 536 MobiDBLite consensus disorder prediction 472 536 - -
Eupl09g01073 536 FunFam U3 small nucleolar RNA-associated protein 7 108 390 - -
Eupl09g01073 536 Coils Coil 500 520 - -
Eupl09g01073 536 MobiDBLite consensus disorder prediction 431 458 - -
Eupl09g01073 536 SMART BING4CT_2 355 435 IPR012952 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g01073 118 331 U-box Gene Family AT1G04510 25.439 1.77e-11 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g01073 K14768 - ming:122087047 910.983