Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g01069 ATGGGTAGAGCTCCGTGCTGCGACAAAGCGAACGTGAAGAGGGGACCATGGTCTCCTGAAGAAGATACTAAGCTTAAGGCCTATATCGAGCAGTACGGAACAGGAGGCAACTGGATTGCTCTTCCTCAAAAGATTGGTCTTAAAAGATGTGGAAAGAGTTGCAGACTGAGATGGTTGAATTATTTGAGACCCAACATCAAACATGGTGGTTTTTCTGAAGAAGAAGATAACATCATCTGCAACCTCTATATAAGTATTGGCAGCAGGTGGTCCATAATTGCAGCTCAATTGCCTGGAAGAACTGATAATGACATTAAGAACTACTGGAACACAAGACTGAAGAAAAAGTTGCTTGGAAGGCGTAAAGATTCTCAGGCCCGTCGTGTTTCTTCCCTAAATCAAGACCCCAAAGGTGCAAATGGGATGGATGATAATCAGTACTCGCATGCCTTAAGCAATTCAGCCCTTGAAAGATTGCAACTCCATATGCAGCTTCAAAACCCATTCTCTTTCTATAACAATCCTGCACTGTGGCCCAAGTTGCATCCTTTAGGAGAAAGAATCATGCAGGGTCACTACGGTTTCAACGACGATAGCCGCCCGTCCCCACTGATGCAGCAAGTCCCTAATACTCAAAATGGACCCCGTCACAAGGCGGGGTTCGACGAATTACCGACTGCTTCAACTGGACTTGAATGTGCTAATTCGACAAGTAGCAACCCAAAGCAAGATGAATTTGAGAATTCCTTGCATGATTTCTTGTCATCGGAGAGTTCGATAGCTTTTAACAGTGGAGTCATTAATCCGATTGATATGGCTGTCATACCAAAACCTAATGGTGTTCAACAATTGAACACAAACCTCCAATCAGTAGCTGGTTTACAAGCCGAATTTAGTGACTTACTTTATAACAAAACAGGTGGATTTGTAGCAAATGGTGATCAGATAGTCGAATTCGATTGTTTCAAAGAGATGGATGGTGCGAAAGAGAGCATGATTTGGTGGGCTAATGATTTTGACACAAAATCATCTTCCTCGAATTCTTGGAATTCAGCTTCTGTTCTTCAGCCTGAGGGACTCTTTCAAGATTATGTATTAGGAGGCTATGATCTATAG 1116 0.4283 MGRAPCCDKANVKRGPWSPEEDTKLKAYIEQYGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDNIICNLYISIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLLGRRKDSQARRVSSLNQDPKGANGMDDNQYSHALSNSALERLQLHMQLQNPFSFYNNPALWPKLHPLGERIMQGHYGFNDDSRPSPLMQQVPNTQNGPRHKAGFDELPTASTGLECANSTSSNPKQDEFENSLHDFLSSESSIAFNSGVINPIDMAVIPKPNGVQQLNTNLQSVAGLQAEFSDLLYNKTGGFVANGDQIVEFDCFKEMDGAKESMIWWANDFDTKSSSSNSWNSASVLQPEGLFQDYVLGGYDL* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g01069 371 Gene3D - 70 139 - -
Eupl09g01069 371 CDD SANT 71 113 IPR001005 -
Eupl09g01069 371 MobiDBLite consensus disorder prediction 129 147 - -
Eupl09g01069 371 PANTHER OS09G0431300 PROTEIN 1 353 - -
Eupl09g01069 371 FunFam Transcription factor RAX3 7 68 - -
Eupl09g01069 371 Gene3D - 7 68 - -
Eupl09g01069 371 FunFam Transcription factor MYB36 70 138 - -
Eupl09g01069 371 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Eupl09g01069 371 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Eupl09g01069 371 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Eupl09g01069 371 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Eupl09g01069 371 CDD SANT 16 62 IPR001005 -
Eupl09g01069 371 MobiDBLite consensus disorder prediction 120 147 - -
Eupl09g01069 371 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Eupl09g01069 371 SMART sant 13 64 IPR001005 -
Eupl09g01069 371 SMART sant 67 115 IPR001005 -
Eupl09g01069 371 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Eupl09g01069 371 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g01069 Eupl-Chr9 21489647 21491111 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g01069 1 184 MYB Transcription Factor Family AT5G57620 79.365 1.94e-100 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Eupl09g01069 Myb_DNA-binding 3.9e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g01069 K09422 - nnu:104599102 514.998