Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g01068 ATGGAGTCCCCGGTCCCACCAGCCTCTGGTTCAAACGATGAAACTCCCCGTGTCAAATTCCTCTGCAGCTTTGCTGGAAGCATCTTGCCTCGTCCTCAAGACGGTAAGCTTCGCTATGTTGGAGGAGAAACCCGAATTGTGAGCTTTCCCCGCGACATCACTTACGAGGAACTGATGGTGAGGATGCGGGAGCTGTTCGAAGGGGCGGCCTTGCTGAAGTACCAGCAGCCCGATGAGGATCTCGATGCTTTAGTCTCCGTTGTGAACGATGACGATGTTACAAACATGATGGAGGAATACGAAAAGGTCGGATCGGGGGATGGGTTCACTAGGCTCAGGATATTTCTTTTTTCGCATCCCGATCAAGATACTTCGTCGCACTTCGATACCGATGAGAGGGAGAGTGAACGGAGGTATGTTGACGCTTTAAACAATCTGAATGATGGTCCTGATGTTAGAAAGCAGCAAATACCCGAATCCCCGGTGATGGGTCCGGTGGCTGAACAGTTTTTCAATCCAACGAATCTTGAATTTGGCCTCCATAACCAGCGGAATATCGAGGTGCCGTTACCGCAGTTTAATTTACGTCACCTCACAATTCCTCATCTTGGGTCGGGGCAACACCAACCATCTCATAATCAGAGGTATAACGAAATGGAGGCTCCGTGGAGTCCTGCATATTATTCGCCCAGGCATCACGGACAACACCATGATTCGAGACCCATGACAGAGTTTCCGACTTCACCTTCGTCCGCCCATTACCGTGTGGCATTTGGAGAGTGCTCCGATAGGATGCCTGAAGAATATGGTCGGCAGCCGGTGAATCATCAGCCCCAATATGAGCACCAGCCACCATTTGTTGATAATGTGGTATGGCTTCCACCTGGAGCTGTACCCGGTGATAAGGCTGGGTTTCCAGGTAACCTCAGTCATGCTAACAATGTTTTAGAAGGGAATAGTATCTGTGAGCATTGTCGGATGACTTTTCAAAGAAATCATACTTCGCCGGAGGCTGCTCGCTATCCCAATTATAGCTGGAAGCAGGGAGGACAACCAAATTTGGAGCCACTGAACACGGGGAATGAATTCCATCAGTTTGCTAATCCATGCGCTGAGTGCACCCCTAGTAGGGAGACTTATGTTTTGAATCCGGATGGAAAATTGGACCACGGAATTTACTCCAAAGATCAAAACGAGCTCCGAAGCTTCTATAACGAAGCTCACGTTCTTGAGAGAGGACGGGTCCTACACCAACAATTGAACTATCGGGGTGAGGAACCAAGAAATATGTCTGGAGCTGGAAGGATGAATGAGCACTATGTGGGAGATGGTACTAGTGTTAATTTTCCTCTTGCACATGGTAATTGTGGCGATGGCCATCCAGCATCTTCTAATTGTATCAATCACGAAGACCCACGTTGCATTCGATCTGGATCTGGATTGGGGAATGAAGGGTTTCATGACCAAGCTGTGGGAGCTGTACCTCACATTCACATTCCTGCACTAGAAGACCGCGGAGTCCGGTATGGGAATTTCCCTGCCGCTTATGGAACAGATAATCTTTATCAAGTATCACATGGACCTGCGCCTGCACATGCTTTATGGAGAAAGGTGCAGAACCCATTGCATGGTGCTCCGTCTTATGAAGCATCAAATTTTCTGCCTCAAGCTAATGGTGCGGTTAATTTGGGGTTCCCACGGGTTATGCAGGATGGCAGTCCTAGGTTTCATATTGGGGTGGATAATCCAAACACTTGGTCTGGGTCCACACACAAAATATTTGGCTTTGATGGGTCTGCTGCCCCAGAATATCCCCATGGCTATGCTCCGAAGTTGAATCCAAACACTCTTGGTCAGGAAAGCCAACACCCTCCAGATCCTGTTCAATCTCCACATGACATGATTGACTTTGGCATTCCTACGGAACCTGTGCCCCATGTGTCTTCATCTTCATCTTTGATTGATAATAAAATGCTTGCTTCAACTACTTCAGGTTACAACCCAGCGCCCACAGATGGTGCCAATGCTACTGGAGCATTGAGATTGGAGGAGAAAAGTATGCTTGGTGAGGATTATGAAGCTAAGCGTGTAGAAACGCCAGAAGACTCTGATATGCCAAGTAACTCCATTGCAGATACTAATGCGGAGGTGTACAAGAAAAGCAGGGAGGCTGATTCTGGTTCAAATGCCTTGAGGCCTACTGAAGAGGGTGGTGATACTGTGAAACTTGGTGAAACTGATGTTCATGCCACATTTGAACATGAGGGACTCTCTGTTAAGCGTTTAAGTTTCCTGCCTGAGTTGTTTGCTTCAGTAAAAAAGGCAGCATTAGAAGGTGTTGAGGAGGTGCAAGCTAGAGTGCAAGGAAATGTTGATGGTGATGTTGATCCAGCATCAAAAGAAGCAAGTTTTAAGGAATTAGAATATGTGAATGGCCATGTGGATGTGGAGGATGACTCTGCCATAGACCATCCAGATGTTTCCAAGATTGAACCAACGAAGGCTGAGGCAGAAGCTTTGTCTAGAGGATTACAGACGATAAAAAATGATGACCTGGAGGAAATACGAGAATTGGGCACTGGTACATATGGGGCCGTTTATCATGGGAAATGGAAGGGTTCTGATGTAGCGGTAAAAAGAATAAAAGCTAGTTGCTTTGCTGGGAGACCATCTGAGCGAGCACGCTTGATTGCTGATTTCTGGAAGGAGGCGTTGATATTGAGTTCATTGCATCATCCCAATGTTGTTTCTTTTTATGGTATAGTTCGTGATGGTCCTGACGGATCTTTAGCTACTGTGACAGAGTTCATGGTTAATGGATCTCTGAAACAATTTTTGCAAAAGAAAGACCGAACAATTGATCGTCGTAAGAGGCTCATCATAGCTATGGATGCTGCATTTGGCATGGAGTATTTGCATGGGAAGAATATTGTTCATTTTGATCTAAAGTGTGAGAATCTATTAGTAAATATGAGAGATCCTCATAGACCTGTCTGCAAGATTGGTGATCTGGGCTTATCGAAGGTAAAGCAACACACCTTAGTGTCAGGAGGCGTCCGTGGAACTTTACCATGGATGGCACCTGAACTTCTTAGTGGGAAAAGTAACATGGTAACAGAAAAGATTGATGTCTATTCATTTGGGATTGTCATGTGGGAATTGCTTACTGGAGAGGAACCTTATGCGGATATGCATTGTGCTTCTATAATTGGGGGAATTGTGAACAACACATTACGGCCACAAATTCCAACATGGTGTGATCCCGAGTGGAAATCTTTGATGGAAAGTTGTTGGTCTTCTGATCCAGGGGAGAGACCATCCTTCTCTGAAATTTCGCAGAAGCTGAGGAAAATGTCTGCTGCAATCAATTTGAAGTGA 3378 0.4612 MESPVPPASGSNDETPRVKFLCSFAGSILPRPQDGKLRYVGGETRIVSFPRDITYEELMVRMRELFEGAALLKYQQPDEDLDALVSVVNDDDVTNMMEEYEKVGSGDGFTRLRIFLFSHPDQDTSSHFDTDERESERRYVDALNNLNDGPDVRKQQIPESPVMGPVAEQFFNPTNLEFGLHNQRNIEVPLPQFNLRHLTIPHLGSGQHQPSHNQRYNEMEAPWSPAYYSPRHHGQHHDSRPMTEFPTSPSSAHYRVAFGECSDRMPEEYGRQPVNHQPQYEHQPPFVDNVVWLPPGAVPGDKAGFPGNLSHANNVLEGNSICEHCRMTFQRNHTSPEAARYPNYSWKQGGQPNLEPLNTGNEFHQFANPCAECTPSRETYVLNPDGKLDHGIYSKDQNELRSFYNEAHVLERGRVLHQQLNYRGEEPRNMSGAGRMNEHYVGDGTSVNFPLAHGNCGDGHPASSNCINHEDPRCIRSGSGLGNEGFHDQAVGAVPHIHIPALEDRGVRYGNFPAAYGTDNLYQVSHGPAPAHALWRKVQNPLHGAPSYEASNFLPQANGAVNLGFPRVMQDGSPRFHIGVDNPNTWSGSTHKIFGFDGSAAPEYPHGYAPKLNPNTLGQESQHPPDPVQSPHDMIDFGIPTEPVPHVSSSSSLIDNKMLASTTSGYNPAPTDGANATGALRLEEKSMLGEDYEAKRVETPEDSDMPSNSIADTNAEVYKKSREADSGSNALRPTEEGGDTVKLGETDVHATFEHEGLSVKRLSFLPELFASVKKAALEGVEEVQARVQGNVDGDVDPASKEASFKELEYVNGHVDVEDDSAIDHPDVSKIEPTKAEAEALSRGLQTIKNDDLEEIRELGTGTYGAVYHGKWKGSDVAVKRIKASCFAGRPSERARLIADFWKEALILSSLHHPNVVSFYGIVRDGPDGSLATVTEFMVNGSLKQFLQKKDRTIDRRKRLIIAMDAAFGMEYLHGKNIVHFDLKCENLLVNMRDPHRPVCKIGDLGLSKVKQHTLVSGGVRGTLPWMAPELLSGKSNMVTEKIDVYSFGIVMWELLTGEEPYADMHCASIIGGIVNNTLRPQIPTWCDPEWKSLMESCWSSDPGERPSFSEISQKLRKMSAAINLK* 1126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g01068 1125 CDD PB1_UP2 21 117 - -
Eupl09g01068 1125 PANTHER SERINE-THREONINE PROTEIN KINASE 75 1116 - -
Eupl09g01068 1125 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 37 119 - -
Eupl09g01068 1125 SMART serkin_6 852 1122 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl09g01068 1125 Pfam Protein tyrosine and serine/threonine kinase 853 1115 IPR001245 GO:0004672|GO:0006468
Eupl09g01068 1125 ProSitePatterns Protein kinases ATP-binding region signature. 858 879 IPR017441 GO:0005524
Eupl09g01068 1125 Gene3D Transferase(Phosphotransferase) domain 1 939 1124 - -
Eupl09g01068 1125 ProSiteProfiles Protein kinase domain profile. 852 1122 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl09g01068 1125 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 845 939 - -
Eupl09g01068 1125 Gene3D - 36 119 - -
Eupl09g01068 1125 SUPERFAMILY Protein kinase-like (PK-like) 841 1113 IPR011009 -
Eupl09g01068 1125 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 940 1125 - -
Eupl09g01068 1125 MobiDBLite consensus disorder prediction 230 249 - -
Eupl09g01068 1125 Pfam PB1 domain 33 117 IPR000270 GO:0005515
Eupl09g01068 1125 CDD STKc_MAP3K-like 858 1115 - -
Eupl09g01068 1125 MobiDBLite consensus disorder prediction 696 742 - -
Eupl09g01068 1125 ProSitePatterns Serine/Threonine protein kinases active-site signature. 977 989 IPR008271 GO:0004672|GO:0006468
Eupl09g01068 1125 Gene3D Phosphorylase Kinase; domain 1 837 938 - -
Eupl09g01068 1125 MobiDBLite consensus disorder prediction 605 632 - -
Eupl09g01068 1125 PRINTS Tyrosine kinase catalytic domain signature 971 989 IPR001245 GO:0004672|GO:0006468
Eupl09g01068 1125 PRINTS Tyrosine kinase catalytic domain signature 1086 1108 IPR001245 GO:0004672|GO:0006468
Eupl09g01068 1125 PRINTS Tyrosine kinase catalytic domain signature 1042 1064 IPR001245 GO:0004672|GO:0006468
Eupl09g01068 1125 PRINTS Tyrosine kinase catalytic domain signature 934 947 IPR001245 GO:0004672|GO:0006468
Eupl09g01068 1125 SMART PB1_new 32 117 IPR000270 GO:0005515
Eupl09g01068 1125 SUPERFAMILY CAD & PB1 domains 34 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g01068 Eupl-Chr9 21467169 21480287 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g01068 12 1125 MAP Kinase Kinase Kinase AT5G57610 55.215 0.0 1064
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Eupl09g01068 PK_Tyr_Ser-Thr 9.7e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g01068 - - nnu:104599103 1672.52