Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g01054 ATGGAGACCGTAACACAGAAACAAGACATCATTTATCGCTCGAAACTACCCGATATTTACATCCCGAATCATCTCCCCCTACATTCGTATTGTTTCGAAAACATATCTCAATTCAGCGACCGCCCATGTTTGATAAACGGCGCAACAGGTGAAATACTCTCTTACGCAGATGTCGAGCTCACCTCGCGCAAAGTAGCAGCCGGCCTTAACAAACTCGGCATCAAACAAGGTCAAGTCATCATGCTCTTACTCCCCAACACGCCCGAGTTCGTATTCGCGTTCCTCGGCGCCTCGTATCGCGGTGCCATATCTACGACAGCGAATCCATTCTACACTCCCGCAGAAATTTCAAAGCAAGCCAAAGCCTCCAACGCTAGACTTATAGTCACGCAAGCTTGTTACGTTGAGAAATTGAAGGATTTAGCACATGAGAACGACGTTAAGATCATGTGTATCGATTCACCACCGGAGGGTTGTTTGCATTTCTCCGAGTTGACTCAGTCAGATGAGTCGGAGATGCCCAATGTAGAAATTAACCCAGATGACGTGGTGGCGCTACCGTACTCGTCCGGTACTACTGGAATGCCTAAAGGAGTCATGTTGACTCACAAAGGATTGGTCACGAGCGTTGCTCAACAGGTCGACGGAGAGAATCCTAACTTGTATTTTAACAGCGAGGACGTCTTGTTATGTGTCTTGCCACTCTTTCATATCTACTCACTCAACTCGGTGTTGCTTTGTGGGTTACGAGTTGGCTCGGCGATTCTACTCATGCAGAAATTTGAGATTTTAGCACTGATGGAGCTGATACAGAAATATAAAGTGACGATCGCACCGTTCGTTCCTCCGATCGTCTTAGCGATTGCTAAGAGCCCAGTCGTTGATAATTACGATCTTTCTACGATACGGACGGTGATGTCGGGTGCCGCACCCATGGGGAAGGAGCTTGAAGATACTGTTAGAGCCAAGCTTCCCAATGCCAAGCTTGGACAGGGATATGGAATGACGGAGGCCGGACCACTGTTGTCGATGTGTTTGGCATTTGCGAAGGAACCGTTTGAGATAAAATCCGGGTCATGTGGGACCGTCGTTAGGAACGCAGAGATGAAGATCGTCGATCCGGATTCGGGTGCCTCGCTTCCTCGAAATCAACCCGGAGAGATTTGCATTCGTGGAGCCCAGATCATGAAAGGTTATCTCAACGATCCTGAGGCCACAGAGAGAACCATCGACAAAGAGGGTTGGTTACATACAGGCGACATTGGCTTCATCGACGATGACGATGAGATCTTCATTGTGGATCGATTGAAGGAACTAATCAAGTACAAAGGGTTCCAGGTTGCCCCCGCCGAGCTCGAAGCCATGCTCATCAACCATCCCAACATCTCCGATGCCGCCGTCGTCCCTATGAAAGACGAAGCTGCCGGCGAGGTTCCTGTGGCTTTCGTCGTGAGATCAAACGGCTCACAGATAACCGAGGACGAAATCAAGCAATACATCTCTAAACAGGTGGTGTTTTATAAGAGGATAAGCCGGGTGTTCTTCATGGATTCCATTCCCAAAGCGCCATCTGGCAAGATCCTGAGGAAGGATTTAAGAGCAAAGCTGGCAGCCGGTTTACCCAATTAG 1629 0.488 METVTQKQDIIYRSKLPDIYIPNHLPLHSYCFENISQFSDRPCLINGATGEILSYADVELTSRKVAAGLNKLGIKQGQVIMLLLPNTPEFVFAFLGASYRGAISTTANPFYTPAEISKQAKASNARLIVTQACYVEKLKDLAHENDVKIMCIDSPPEGCLHFSELTQSDESEMPNVEINPDDVVALPYSSGTTGMPKGVMLTHKGLVTSVAQQVDGENPNLYFNSEDVLLCVLPLFHIYSLNSVLLCGLRVGSAILLMQKFEILALMELIQKYKVTIAPFVPPIVLAIAKSPVVDNYDLSTIRTVMSGAAPMGKELEDTVRAKLPNAKLGQGYGMTEAGPLLSMCLAFAKEPFEIKSGSCGTVVRNAEMKIVDPDSGASLPRNQPGEICIRGAQIMKGYLNDPEATERTIDKEGWLHTGDIGFIDDDDEIFIVDRLKELIKYKGFQVAPAELEAMLINHPNISDAAVVPMKDEAAGEVPVAFVVRSNGSQITEDEIKQYISKQVVFYKRISRVFFMDSIPKAPSGKILRKDLRAKLAAGLPN* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g01054 542 Gene3D - 2 436 IPR042099 -
Eupl09g01054 542 FunFam Long-chain-fatty-acid--CoA ligase FadD 13 437 - -
Eupl09g01054 542 Gene3D - 437 538 IPR045851 -
Eupl09g01054 542 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 7 534 - -
Eupl09g01054 542 Pfam AMP-binding enzyme C-terminal domain 451 526 IPR025110 -
Eupl09g01054 542 CDD 4CL 21 532 - -
Eupl09g01054 542 Pfam AMP-binding enzyme 33 442 IPR000873 -
Eupl09g01054 542 FunFam 4-coumarate--CoA ligase 2 438 539 - -
Eupl09g01054 542 SUPERFAMILY Acetyl-CoA synthetase-like 11 538 - -
Eupl09g01054 542 ProSitePatterns Putative AMP-binding domain signature. 186 197 IPR020845 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g01054 Eupl-Chr9 21176903 21182303 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g01054 9 504 Monolignol Biosynthesis Gene Families AT1G51680 72.817 0.0 749
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g01054 K01904 - nnu:104603180 934.48