Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g01030 ATGGATTCTTCTTTCGAGGGATTTGTGCTTGACCCTTCCAAATGCAGTAAGTTGAGTATGGATGAAAAAAGAGAACTTGTCTATGAAATATCAAAGCGGTCGCATGGCGCTCCTGAATTACTACAGTCATGGAGCCGGCGGGAACTTTTACAGATCCTGTGTGCGGAGATGGGAAAAGAAAGGAAATATACCGGCTTGACAAAGTTCAAAATGATAGAGCATCTTTTGAGAATTGTATCTGAGAAGAAGTCCTTGAAACGAGTGGATGGAGCAGACTTTGAGTCACAACTTTCACCTGCAAACAACCAAAACGCTTCCAAGAGGCAGAGGAAGACAGATAACCCTTCACGACTGCCCATTGCAGCTAACCATTTCTCCATCAGCAATAGCAATGGGGATCTAGGTAATGCCATATACTGCCAAAACTCCGCTTGCAGAGCAACTCTACGCCAGGAGGACTCCTTCTGCAAGAGGTGCTCTTGCTGCATCTGTTACCGATATGACGACAACAAGGATCCTAGTCTTTGGTTGGTTTGCAGCTCGGAGCATCCTTATCAAGGTGATTCATGTGGCATGTCATGTCATCTCGAATGTGCTCTTAAGCATGAAAGGGCTGGCATTGCTAAGGATGGGCACCATGCAAGACTGGATGGGAGCTTTTATTGTGTATCTTGCGGAAAAGTGAATGACTTGATTGGATGCTGGAGGAAACAACTAATGACAGCAAAGGATACTAGACGGGTGGACATATTGTGTTATCGTGTCTCTCTCAGCTTAAAGCTTCTCAGGGGAACTGAGAAGTACCAAAAGCTGAATGAGATTGTGGAAACAGCAGCAAAGAAGCTCGAAGTTGAAGTAGGGCCTTTAGCTGGTTTACCTGTAAAGAGGGCACGGGGTATTGTCAACAGGCTCTCTTCTGGCCCGGAGGTTCAGAAGCTGTGTGCATCTGCAGTGGAGTCACTAGATTCAATGCTTTCATATAGTTTCCTGCATCCACCACACAATTCTAAGATTCAAGAGTTCAGTTTGACATCTCCAGGCTTTATCAGGTTTGAAATTGTGTCCCCGACAACTCTTACTGTGGTCTTGGGTTCCAAAGATGCATCACTGGAAGAGCTTGTGGGGTATACCTTGTGGCATCGCAAGGCTGATGTAATGGACTATCCTGCAGAACCAACCTGTACTTTGTTTGCACCGAACACAAGGTTTTCAGTGTTAGATCTCGCTCCAGCTACAGAGTATGTGTTCAAGGTTGTTTCCTTCAACAATACGAGAGAGTTGGGGATGTGGGAAGCTAGGTTTACAACGGACAGTGCTGGGAACGATGTGGCTAAGAACTTGGTGGTAGAAAGAGATCAAAGCCCAACAACCAACAGTAGCAGCCTGTCTAATCCTTCTGAAGGAGATGAATCTAATAATAATGCTGCGTACGGAGATCATATTGATAATCTCCCAGGAATTTACTTTGGTCATTGTGAGAAAACTGATATCCAAGATTTGGGCAAATTATCTGATGATGCCAACAAAGTTATAAGTGATTCCCAGAACTTAAGCACTGGCACAGATCAGGAGGAAATACCAGGAGATTCAGCTTCTGCTTTGGATGAGGAACGCTTGACGGGGGAAGTGGGATCTGAACCCAACTCAACAATCCGGATAGAGTCTCAGAGGGACTCGACAAACTCAACCATTGGCAACCAGGTTTCTGACATCCCGAAACCTGAGAACAAGCACTCACCCGAAGGTCGATTGGTTGAGGAGACTAGCACTGATAATGGGTCAAACACCCCTGTCAGGAAAGAGATGGAAATCGTGCCATTTGAGCATGGCTCTGATGCCGTCCTACCCATCACTCCCTGCAAGCTGGAGATTGGCAAGGATGGGCCAGGAAGGAGTGGGAGACTAAAACCCAGTGATGACCTTGACAATGCGTCTGGGAAGCCTGAGAAGGAAACGCAAGCTGGTAGTTCGTCAAAGAAAGGTGGTGCCAGGTGGAATGAGGAGTGCACTAGAGATGGTTCTTTGGAGAGGGAGTATGAGCACTGTGTGAAGGTTATCAGGCGGTTGGAGTGCGAGGGGCACATTGAGAAGAACTTCAGGGTGAAGTTCCTGACTTGGTACAGCTTGCGAGCAACCCCACAGGAGAGGAGGATTGTGAAAGTGTTTGTCGATACATTTGTCGATGATCCAACATGTCTTGCGGGGCAACTGATCGACACCTTCTCAGAAGGTATATCCAGCAAGAGACCACCGACCATACCAACTGGGTTCTGCATGAAGCTTTGGCATTAA 2292 0.4668 MDSSFEGFVLDPSKCSKLSMDEKRELVYEISKRSHGAPELLQSWSRRELLQILCAEMGKERKYTGLTKFKMIEHLLRIVSEKKSLKRVDGADFESQLSPANNQNASKRQRKTDNPSRLPIAANHFSISNSNGDLGNAIYCQNSACRATLRQEDSFCKRCSCCICYRYDDNKDPSLWLVCSSEHPYQGDSCGMSCHLECALKHERAGIAKDGHHARLDGSFYCVSCGKVNDLIGCWRKQLMTAKDTRRVDILCYRVSLSLKLLRGTEKYQKLNEIVETAAKKLEVEVGPLAGLPVKRARGIVNRLSSGPEVQKLCASAVESLDSMLSYSFLHPPHNSKIQEFSLTSPGFIRFEIVSPTTLTVVLGSKDASLEELVGYTLWHRKADVMDYPAEPTCTLFAPNTRFSVLDLAPATEYVFKVVSFNNTRELGMWEARFTTDSAGNDVAKNLVVERDQSPTTNSSSLSNPSEGDESNNNAAYGDHIDNLPGIYFGHCEKTDIQDLGKLSDDANKVISDSQNLSTGTDQEEIPGDSASALDEERLTGEVGSEPNSTIRIESQRDSTNSTIGNQVSDIPKPENKHSPEGRLVEETSTDNGSNTPVRKEMEIVPFEHGSDAVLPITPCKLEIGKDGPGRSGRLKPSDDLDNASGKPEKETQAGSSSKKGGARWNEECTRDGSLEREYEHCVKVIRRLECEGHIEKNFRVKFLTWYSLRATPQERRIVKVFVDTFVDDPTCLAGQLIDTFSEGISSKRPPTIPTGFCMKLWH* 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g01030 763 ProSiteProfiles Fibronectin type-III domain profile. 345 441 IPR003961 GO:0005515
Eupl09g01030 763 MobiDBLite consensus disorder prediction 513 599 - -
Eupl09g01030 763 CDD PHD_VIN3_plant 160 225 - -
Eupl09g01030 763 MobiDBLite consensus disorder prediction 450 478 - -
Eupl09g01030 763 Pfam PHD - plant homeodomain finger protein 140 259 IPR032881 -
Eupl09g01030 763 MobiDBLite consensus disorder prediction 95 117 - -
Eupl09g01030 763 Gene3D Immunoglobulins 342 445 IPR013783 -
Eupl09g01030 763 MobiDBLite consensus disorder prediction 95 109 - -
Eupl09g01030 763 MobiDBLite consensus disorder prediction 620 670 - -
Eupl09g01030 763 MobiDBLite consensus disorder prediction 543 573 - -
Eupl09g01030 763 CDD FN3 346 423 IPR003961 GO:0005515
Eupl09g01030 763 PANTHER VIN3-LIKE PROTEIN 2-RELATED 8 763 IPR044514 GO:0010048|GO:0040029
Eupl09g01030 763 MobiDBLite consensus disorder prediction 627 647 - -
Eupl09g01030 763 SUPERFAMILY Fibronectin type III 346 425 IPR036116 GO:0005515
Eupl09g01030 763 MobiDBLite consensus disorder prediction 448 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g01030 Eupl-Chr9 20841275 20854873 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g01030 1 474 PHD Gene Family AT4G30200 54.183 2.30e-163 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g01030 - - nnu:104590430 1084.32