Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g01027 ATGTTTCCTTGTCTCTTCTTACAGCAGACAGAGAAGAAAACCTGCAACAAGGAAAGCTCATGGCGACCTCTTCTTCTTCTTCTTAGGATCACTTTTCTTTTTTCTTTTTTCTTTTTTCGTTTTTCGTTTCAAAACAAAGACCCCCTTTTGAAATCCTTGCTGAAAATGCGGCATTTGTACCTCCGGAAGAGCAGTTTCAAACGCCTTTTCTCCTCTTTCAAGGAAAACAACAGTCCTCCTCCTCATGAACACGACAACAACAAGAATGAAACCATGGTGATTTCTTCAGTAACAGAGCCATCTCTAAAACCCACTTGGAAATGCTTCTCTTATGAGGAGATCTTCGAAGCAACTGATGGTTTCAACACAGATAATTTGGTAGGGAGAGGTGGGTATGCAGAGGTTTACAGGGGAGTTCTGAAAGATGGTCAGATAATTGCGGTAAAACGGCTTTCGAGAGCTGCTACAGATGAACGGAAAGAGAAGGAATTCTTAACGGAGCTTGGAACTATCGGCCATGTTCGCCACCCAAACGTGTCGTCTTTGTTGGGTTGTTGCATCGACCAAGGCCTTCATTTCATCTTTCAGTTCTCTCTTCACGGCTCTGTCTCTTCTGTTCTCCACGATGAGAATTCGCCGCCAATGGGTTGGAAAATAAGGTACAAGATTGCTGTAGGAACAGCTCGAGGACTCCATTACTTGCACAAAGGCTGTCAAAGGCGGATAATTCATAGGGACATCAAGGCCTCTAACATTCTCTTAACAGCAGATTTCGAACCTCAGATTTCGGATTTCGGACTGGCGAAATGGCTTCCATCTCAATGGACCCATCACTCGATCGTTCCAATCGAGGGGACATTTGGATACTTAGCACCTGAGTACTTCATGCACGGAATTGTCGACGAGAAGACAGACGTCTTCGCTTTCGGAGTCTTTCTACTGGAAATCATCTCTGGCCGAAAACCCGTCGATGGATCCCACCAAAGCTTACTTAGCTGGGCGAAACCTCACTTGAATGAGGGGGAACTAGAAAAACTTGTAGATCCAAGGCTTGGAGGAGACTATGATACTACACAATTGAAGAGGCTTGCTTTCACAGCATCTCTCTGCATTCGAGCATCTGCCACATGGCGCCCTACTATGAGCGAGGTTTTGGAAGTAATGGTGGATGAAGAGATGGTTAAGGAGAAGTGGAAAATGCCAGAGGAGGAAGAAGCGGAAGAAGAATTCTGCGGTTTTGAGGATCTAGAATGTGAATGTGACAGCCCATTTTCAACGTCCCCTCTCGACTCAATCTCAACGGGCAGCTCTTAG 1314 0.4536 MFPCLFLQQTEKKTCNKESSWRPLLLLLRITFLFSFFFFRFSFQNKDPLLKSLLKMRHLYLRKSSFKRLFSSFKENNSPPPHEHDNNKNETMVISSVTEPSLKPTWKCFSYEEIFEATDGFNTDNLVGRGGYAEVYRGVLKDGQIIAVKRLSRAATDERKEKEFLTELGTIGHVRHPNVSSLLGCCIDQGLHFIFQFSLHGSVSSVLHDENSPPMGWKIRYKIAVGTARGLHYLHKGCQRRIIHRDIKASNILLTADFEPQISDFGLAKWLPSQWTHHSIVPIEGTFGYLAPEYFMHGIVDEKTDVFAFGVFLLEIISGRKPVDGSHQSLLSWAKPHLNEGELEKLVDPRLGGDYDTTQLKRLAFTASLCIRASATWRPTMSEVLEVMVDEEMVKEKWKMPEEEEAEEEFCGFEDLECECDSPFSTSPLDSISTGSS* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g01027 437 CDD STKc_IRAK 127 388 - -
Eupl09g01027 437 Gene3D Phosphorylase Kinase; domain 1 82 195 - -
Eupl09g01027 437 ProSitePatterns Protein kinases ATP-binding region signature. 127 149 IPR017441 GO:0005524
Eupl09g01027 437 SUPERFAMILY Protein kinase-like (PK-like) 97 387 IPR011009 -
Eupl09g01027 437 FunFam Putative receptor-like serine/threonine-protein kinase 199 412 - -
Eupl09g01027 437 ProSitePatterns Serine/Threonine protein kinases active-site signature. 242 254 IPR008271 GO:0004672|GO:0006468
Eupl09g01027 437 FunFam Putative receptor-like serine/threonine-protein kinase 87 197 - -
Eupl09g01027 437 Pfam Protein tyrosine and serine/threonine kinase 124 385 IPR001245 GO:0004672|GO:0006468
Eupl09g01027 437 PANTHER OS08G0249100 PROTEIN 67 410 IPR046958 -
Eupl09g01027 437 ProSiteProfiles Protein kinase domain profile. 121 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl09g01027 437 Gene3D Transferase(Phosphotransferase) domain 1 199 411 - -
Eupl09g01027 437 SMART serkin_6 121 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g01027 Eupl-Chr9 20810653 20814744 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g01027 73 388 Trihelix Transcription Factor Family AT5G38560 40.673 4.96e-73 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Eupl09g01027 PK_Tyr_Ser-Thr 3e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g01027 - - nnu:104590677 569.696