Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g01026 ATGTACTCGAGCCAGTTTGATGGCAACGCCGCCTTCTCTGGCGGTGGTTTCATGGCTTCTCAAGCAACTCAAACTACCGATTATGGTGTTTCTCCAGCCAAAAATCGCGATTCTCAGGGCTTGCTTCCGCTAACAGTGAAGCAGATAAGCGAAGCTTATCATTCAAGCGAGGACAAATCCAATTTCGTTGTCGACGGCGTCGACGTGAACAACGTTAAGCTACTTGGAATGATTTTTAATAAAGCCGAAAGGGTTACGGAGGTTGCTTTCACTCTGGACGATGGAACTGGACGAGTTGACTGTCATAGATGGATGAACGAGAATATAGACTCAAAGGAGATGGAGGAAATACAGGATGGAATGTATGTTCGAATTCATGGGCACTTGAAAGGATTTCAGGGCAAGAAACATTTAGTTGTCTTCTCTGTTAGGCCTGTGACGGACTTCAATGAGGTTGCTTACCACTTCATCGAGTGTATACATGTCCATTTTACCAACACCAGATTACAGAAGGTGCAGGGCGGTGCCCAGGCACAATCCCAGATGACAAATCCAGCAATGAACACTCCTTTGCAGAATGGATCAATGGGATATCAAGCTGCCATTCCAAATCAATTTTCTGGGCAAATAAGCTTTGATGGAATTAAGGGCATTGATCAAAAGGTCCTCGACTATTTGCAGCAACCTGCAAACCTTGGAAGGGAAAAGGGGGTACATAGGGATGAACTAGTCCAGCAGCTAAAATTACCGCTGGAGAAGATCATGGAATCTATTAGATCTCTTGAAGAGGAAGGTGCGATTTACTCAACAATTGATGACTGTCACTACAAGTCTACTGTAAACGGTTGA 849 0.4452 MYSSQFDGNAAFSGGGFMASQATQTTDYGVSPAKNRDSQGLLPLTVKQISEAYHSSEDKSNFVVDGVDVNNVKLLGMIFNKAERVTEVAFTLDDGTGRVDCHRWMNENIDSKEMEEIQDGMYVRIHGHLKGFQGKKHLVVFSVRPVTDFNEVAYHFIECIHVHFTNTRLQKVQGGAQAQSQMTNPAMNTPLQNGSMGYQAAIPNQFSGQISFDGIKGIDQKVLDYLQQPANLGREKGVHRDELVQQLKLPLEKIMESIRSLEEEGAIYSTIDDCHYKSTVNG* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g01026 282 PANTHER REPLICATION PROTEIN A-RELATED 5 280 IPR040260 -
Eupl09g01026 282 Gene3D - 208 281 IPR036388 -
Eupl09g01026 282 FunFam replication protein A 32 kDa subunit A-like 34 168 - -
Eupl09g01026 282 CDD RPA2_DBD_D 73 164 - -
Eupl09g01026 282 FunFam Replication protein A 32 kDa subunit 211 280 - -
Eupl09g01026 282 Pfam Replication protein A C terminal 163 273 IPR014892 -
Eupl09g01026 282 Pfam OB-fold nucleic acid binding domain 73 144 IPR004365 GO:0003676
Eupl09g01026 282 SUPERFAMILY Nucleic acid-binding proteins 41 167 IPR012340 -
Eupl09g01026 282 SUPERFAMILY "Winged helix" DNA-binding domain 213 279 IPR036390 -
Eupl09g01026 282 PIRSF RPA32 1 280 IPR014646 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Eupl09g01026 282 Gene3D - 33 168 IPR012340 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g01026 3 277 Core DNA Replication Machinery Family AT2G24490 51.799 4.29e-100 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g01026 K10739 - nnu:104600508 462.996