Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g01024 ATGCCAGGATTGACCTGCAACGCCTGCAATTCAGAGTTCGAAGATGAATCGAAGCAGAAGTTTCATTACAAGTCCGAATGGCACCGCTACAATCTCAAGCGAAAGGTTGCAGGGGTTCCTGGGGTGACGGAGGCATTGTTTCTAGCTAGACAATCTGCACTAGCCCAAGAACAGAACAAGTCGAATGAGAACCCCATGTTATATAGTTGTGCTCTTTGTGGGAAGGGGTATAGAAGCTCCAAGGCTCATTCTCAGCATCTTAAATCGCGGTCTCATATTATACGGGCATCCCGGGGAACGGGTGATTCCGAAAGCATGGGAGTTACAGTCATTAAGCCACTTCCAAACCGAGTGGCCAATAAGCCTCCTCCACCGAGAGAGGCAGAGGATGAAGAGAGTGAAAACAGCGAAGATGAATGGGAGGAGGTTGACCCAGATGACGAGTTAGTTGGTGAGGCTACTGATTCTTTAACCAACTTGAATGTGAAAGAACTTGCCGTGGATGATGATATAGATGATGATGATATGGATGATGATGAGTTGGATACTTCCTGCTGCTTCATCTGTGATTTAAAGCATAGCACCATAGAAAGCTGCATGGTTCACATGCACAAGCGGCACGGGTTCTTCATCCCTGATGTTGAGTACCTGAAGGATCCCAAGGGCCTGCTTACTTATGTTGGTCTTAAGGTCAAAAGGGATTTTATGTGCTTGTATTGCAATGATAGGTGCCATCCTTTCAACAGCCTGGAAGCAGTAAGGAAGCATATGGTGGCAAAAAGTCACTGCAAAGTACGTTATGGGGATGGAGGTGATGACGAGGAAGCTGAGTTGGAAGATTTCTATGACTATAGCAGCAGTTACATGGATGCAGATGGGAAACAGATAGTGACATCGGATGACATGAACAACACTGTTGAACTTGGAAGTGGGGGTTCTGAGCTTGTGGTAAGAAGAAAAATGGACGATGGGACATCCATAAAAATTCTTGGATCTCGGGAATTTCTGCGCTACTACCGCCAGAAACCTCGCCCCTCTCCTATAAGGGATATCGCCCTTGCTGCTGCATTAGGCTCAAGGTACAGGAGCATGGGCTTGGCAACAGTGCAATCAAAAGAACAGATCGTGAGGTTGAAAGTGTTGAGGCAGATGAATAGATCAGGGGTGGATGCAATGCGGTCCAAGATGGGAATGAAGAGTAATGTCATCAGGAACCTCCCCAAGAATGTCACATATTGA 1239 0.4657 MPGLTCNACNSEFEDESKQKFHYKSEWHRYNLKRKVAGVPGVTEALFLARQSALAQEQNKSNENPMLYSCALCGKGYRSSKAHSQHLKSRSHIIRASRGTGDSESMGVTVIKPLPNRVANKPPPPREAEDEESENSEDEWEEVDPDDELVGEATDSLTNLNVKELAVDDDIDDDDMDDDELDTSCCFICDLKHSTIESCMVHMHKRHGFFIPDVEYLKDPKGLLTYVGLKVKRDFMCLYCNDRCHPFNSLEAVRKHMVAKSHCKVRYGDGGDDEEAELEDFYDYSSSYMDADGKQIVTSDDMNNTVELGSGGSELVVRRKMDDGTSIKILGSREFLRYYRQKPRPSPIRDIALAAALGSRYRSMGLATVQSKEQIVRLKVLRQMNRSGVDAMRSKMGMKSNVIRNLPKNVTY* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g01024 412 SUPERFAMILY beta-beta-alpha zinc fingers 169 231 IPR036236 -
Eupl09g01024 412 SMART ZnF_U1_5 1 35 IPR003604 GO:0003676|GO:0008270
Eupl09g01024 412 SMART c2h2final6 4 28 IPR013087 -
Eupl09g01024 412 SMART c2h2final6 68 92 IPR013087 -
Eupl09g01024 412 SMART c2h2final6 184 207 IPR013087 -
Eupl09g01024 412 SMART c2h2final6 235 262 IPR013087 -
Eupl09g01024 412 MobiDBLite consensus disorder prediction 130 145 - -
Eupl09g01024 412 ProSitePatterns Zinc finger C2H2 type domain signature. 6 28 IPR013087 -
Eupl09g01024 412 ProSiteProfiles Zinc finger C2H2 type domain profile. 68 92 IPR013087 -
Eupl09g01024 412 PANTHER ZINC FINGER PROTEIN 622 2 411 IPR040025 -
Eupl09g01024 412 MobiDBLite consensus disorder prediction 98 145 - -
Eupl09g01024 412 SUPERFAMILY beta-beta-alpha zinc fingers 3 36 IPR036236 -
Eupl09g01024 412 SUPERFAMILY beta-beta-alpha zinc fingers 63 98 IPR036236 -
Eupl09g01024 412 ProSitePatterns Zinc finger C2H2 type domain signature. 70 92 IPR013087 -
Eupl09g01024 412 Pfam C2H2 type zinc-finger (2 copies) 186 287 IPR041661 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g01024 1 412 C2H2 Transcription Factor Family AT4G31420 63.855 0.0 510
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g01024 K14816 - csin:114302542 614.764