Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g01022 ATGTCGACTGACAATTTCTCAATTCCTTCTCCCCCATCGGGTGATTCTGGATCTGCCATTATAGCCTCCCATATAGTAATGAGTATAGTGTCACTTGTAGTACTTCTTCTGATCGCTTGTTATTGCGTGAAAAAGATAAAGGAGTCGCTCGTAATAGATTTGCATGCTCGAATGACTAATGGAGCTTTAGTGATTGCACCCCCAGCCTTGAACACGGTTCAATTTGTGGAGATTGACGCAGCAACAATGGAGAGGTTCCTACATGACATGGCAAGAGAGAAACCTATCAGGTTCTCTGCTCAGCAACTTTGTAGCTTCACTCATAATTACTCAACGAGATTGGGTTCCGGCGGTTTTGGGGTAGTCTACAAAGGAGAGTTCCTGAATGGAGTGAAGATTGCAGTAAAGGTCCTCACCAGAACCTCCGACAAGCGAGTCGAAGAACAGTTTATGGCAGAGGTGGGCACAATTGGTAGAACTTACCATATCAATTTAGTGAGACTCTATGGGTTCTGTATTGACCAATTTATGAGTGCACTTGTATATGAGTACATGGAGAACGGGTCACTTGACAAGTTTTTGTTTAGCAAGACACCAGGGGTTGAATGGGAGAAGCTACATGAGATAGCGATCGGGACGGCCAAAGGGCTCGCATACTTGCACGAAGAGTGCCAACAGATGATAATTCACTATGACATAAAGCCTGGTAATATCCTCCTTGATGCCAACTTCTCTCCCAAGGTTGCAGATTTCGGACTTGCAAAGCTTTGTAATAGGGACAACACTCATGTGACTCTCACAGGATATAGAGGGACTCCAGGTTACTCTGCACCAGAGTTTCTGTTGAATAATTATCCAATAACACATAAGTGTGATGTTTACAGCTTCGGAATGGTGTTGTTTGAGATTGCAGGGAGGAGGAGGAACGCCGATGTTACTCTGGCTGATAGCCTATGTTGGTTTCCAAGAAGGGTTTGGGAGGAGTATGAGAAAGGTGGACTGGTTGAGATAACAGTGGTGTGTGGGATTGATGAGAAGGATAGAGAGGAGGCTGAGAGGATGTTTATGGTGGCTCTGTGGTGTGTTCAAGACGCCCCTGATGCAAGACCCCCAATGAGTCATGTAGTGAAGATGCTGGAGGGGGGAGTGGAAATCATGCCGCCGCCGAAACCATTCCAGTATCTGTACTCACAAGGTGCAGATGTACTCATGCCCCAGAGTGGAAGTGGCACAGGTTCGAGCTATTCGACAACTGGAAGAACTAATTCATCTTGGTACAAAGATTCCACCCCAATCATGAGGAAGTATGAGATACAGATGGCTAGTTCTTCATGA 1335 0.4562 MSTDNFSIPSPPSGDSGSAIIASHIVMSIVSLVVLLLIACYCVKKIKESLVIDLHARMTNGALVIAPPALNTVQFVEIDAATMERFLHDMAREKPIRFSAQQLCSFTHNYSTRLGSGGFGVVYKGEFLNGVKIAVKVLTRTSDKRVEEQFMAEVGTIGRTYHINLVRLYGFCIDQFMSALVYEYMENGSLDKFLFSKTPGVEWEKLHEIAIGTAKGLAYLHEECQQMIIHYDIKPGNILLDANFSPKVADFGLAKLCNRDNTHVTLTGYRGTPGYSAPEFLLNNYPITHKCDVYSFGMVLFEIAGRRRNADVTLADSLCWFPRRVWEEYEKGGLVEITVVCGIDEKDREEAERMFMVALWCVQDAPDARPPMSHVVKMLEGGVEIMPPPKPFQYLYSQGADVLMPQSGSGTGSSYSTTGRTNSSWYKDSTPIMRKYEIQMASSS* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g01022 444 ProSitePatterns Protein kinases ATP-binding region signature. 114 136 IPR017441 GO:0005524
Eupl09g01022 444 SMART serkin_6 108 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl09g01022 444 ProSiteProfiles Protein kinase domain profile. 108 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl09g01022 444 Gene3D Phosphorylase Kinase; domain 1 79 184 - -
Eupl09g01022 444 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 185 389 - -
Eupl09g01022 444 ProSitePatterns Serine/Threonine protein kinases active-site signature. 228 240 IPR008271 GO:0004672|GO:0006468
Eupl09g01022 444 Gene3D Transferase(Phosphotransferase) domain 1 185 385 - -
Eupl09g01022 444 Pfam Protein tyrosine and serine/threonine kinase 111 379 IPR001245 GO:0004672|GO:0006468
Eupl09g01022 444 SUPERFAMILY Protein kinase-like (PK-like) 92 379 IPR011009 -
Eupl09g01022 444 PANTHER OS07G0415500 PROTEIN 18 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g01022 Eupl-Chr9 20767357 20770113 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g01022 97 394 Receptor kinase-like Gene Family AT5G38280 42.997 9.79e-79 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Eupl09g01022 PK_Tyr_Ser-Thr 4.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g01022 - - vvi:100266306 620.928