Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g01000 ATGGAGACCAATTCGGATGAGGAAGGAGAGCATTTTCTGGTAGATGTGGGGGAAGAGGAACACGAAACGGGGCCAAAATTGCGGGTACGTGGATTGAGGAAAGTTTTGGAGACGGGAGTTCCAATACTTAGTGGGGTATGTGTTGATATACCCAAGGGCTTGATTATTGGGATCATCGGACCGAGTGGGAGCGGCAAATCTACGTTGTTGAGGGCTTTGAATCGTTTATGGGAACCTCCTTCTGGTACGGTGTTTCTCGACGGTCAGGATATTTGCGATCTCGATGTACTCAGTCTCCGCCGTAAAGTTGGGATGCTATTCCAGCTCCCTGTTCTCTTTGAAGGCACGGTCGCGGATAACATACGTTACGGGCCACAATTGACAGGCAATAAGCTGACAGAGGACGAGGTATCCAAGCTGCTCACCCTCGCGGACCTCGACATCTCTTTCGCAACCAAAAATGGTAACGAACTATCTGTGGGTCAAGCTCAGAGAGTTGCGCTTGCGCGGACCCTAGCCAACAACCCCGAGGTGTTGCTGTTGGATGAGCCGACGAGTGCTTTGGATCCGATATCAACGCAGAACATAGAGGACGCGATTATGAGGCTGAAGAAGAGCCGTATGTTGACGACCATCATGGTCTCTCACAGCGTCAAACAGATCCAAAGGATAGCTGACATAGTGTGCCTCCTTGTGAACGGAGAGATTGTCGAGGTCTTAAAACCCAACGACCTCTCTAAAGCCAAGCATCCCATGGCTCTGAGGTTCCTCGAACTCAGTTCTTGA 786 0.5051 METNSDEEGEHFLVDVGEEEHETGPKLRVRGLRKVLETGVPILSGVCVDIPKGLIIGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGQDICDLDVLSLRRKVGMLFQLPVLFEGTVADNIRYGPQLTGNKLTEDEVSKLLTLADLDISFATKNGNELSVGQAQRVALARTLANNPEVLLLDEPTSALDPISTQNIEDAIMRLKKSRMLTTIMVSHSVKQIQRIADIVCLLVNGEIVEVLKPNDLSKAKHPMALRFLELSS* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g01000 261 SMART AAA_5 52 235 IPR003593 GO:0016887
Eupl09g01000 261 FunFam ABC transporter, ATP-binding protein 24 256 - -
Eupl09g01000 261 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 26 248 IPR027417 -
Eupl09g01000 261 Pfam ABC transporter 44 186 IPR003439 GO:0005524
Eupl09g01000 261 Gene3D - 14 258 IPR027417 -
Eupl09g01000 261 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 27 258 IPR003439 GO:0005524
Eupl09g01000 261 CDD ABC_PstB_phosphate_transporter 27 245 IPR005670 GO:0005315|GO:0016020|GO:0035435
Eupl09g01000 261 ProSitePatterns ABC transporters family signature. 158 172 IPR017871 GO:0005524|GO:0016887
Eupl09g01000 261 PANTHER ABC TRANSPORTER I FAMILY MEMBER 17 1 260 IPR005670 GO:0005315|GO:0016020|GO:0035435
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g01000 Eupl-Chr9 20323096 20328780 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g01000 40 259 Calmodulin-binding Proteins AT2G36910 34.649 3.22e-35 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g01000 K02068 - nnu:104603146 394.43