Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00985 ATGGAAGAAGAAGAAGCATGCAACATAGGACTTGGTCTTGGACTCGGCTGGGGCGACGAATTCGCGCCGAAGCGCAACCCACAACGACAGCTGCATAATAAGCCTCCAGTTCAATTCCATCTCTTGTTCCCCTCTCATCCGAAAGAGGAAATCTTCGACGAAGAACACGACGTTGTCGATCGATCGAGTTCGAAAACAGTATACGAAGACGAAGAATATGCAAGCAAGAACTATAGTACTAGTGATAACAATGGTGGAACGAGAAAGAAACTCAGGCTTACAAAAGAACAATCCACTTTGCTTGAGGACAGCTTCAAAGAACATAACACCCTTAATCCGACCCAGAAGCAGGAATTGGTGGAGCGATTGAATCTACGGCCTCGACAAGTCGAAGTTTGGTTTCAAAACAGAAGAGCAAGGACAAAGTTGAAGCAAACCGAGGTGGATTGTGAATTCTTGAAGAAATGCTGTGAGAGTCTAAGTGATGAGAACCAGAGGTTGAAGAAGGAGTTACAGGAATTGAGATCAATAAAGCTCGGGGCATCGCCATTTTACATCCAGCTCCCCAAGGCAGCGACACTGACGATGTGCCCGTCGTGCGAAAGGATTGGAAAGACAAGTGAAGGGAAGAACAAAGCAGTCTTCGACGTCGTCGGAAAAACGAAAAAGTTTTATAGTGGCTTTGGTGATTCTTCCTTGGCATGTTAA 708 0.4562 MEEEEACNIGLGLGLGWGDEFAPKRNPQRQLHNKPPVQFHLLFPSHPKEEIFDEEHDVVDRSSSKTVYEDEEYASKNYSTSDNNGGTRKKLRLTKEQSTLLEDSFKEHNTLNPTQKQELVERLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCESLSDENQRLKKELQELRSIKLGASPFYIQLPKAATLTMCPSCERIGKTSEGKNKAVFDVVGKTKKFYSGFGDSSLAC* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00985 235 CDD homeodomain 88 145 IPR001356 GO:0003677
Eupl09g00985 235 SMART HOX_1 86 148 IPR001356 GO:0003677
Eupl09g00985 235 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 10 210 - -
Eupl09g00985 235 Coils Coil 150 177 - -
Eupl09g00985 235 ProSiteProfiles 'Homeobox' domain profile. 84 144 IPR001356 GO:0003677
Eupl09g00985 235 FunFam Homeobox-leucine zipper protein 18 72 149 - -
Eupl09g00985 235 Pfam Homeobox associated leucine zipper 144 176 IPR003106 GO:0006355|GO:0043565
Eupl09g00985 235 Gene3D - 79 149 - -
Eupl09g00985 235 SUPERFAMILY Homeodomain-like 73 145 IPR009057 -
Eupl09g00985 235 SMART halz 144 187 IPR003106 GO:0006355|GO:0043565
Eupl09g00985 235 ProSitePatterns 'Homeobox' domain signature. 119 142 IPR017970 GO:0000981|GO:0006355
Eupl09g00985 235 Pfam Homeodomain 88 142 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00985 Eupl-Chr9 20086360 20087449 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00985 88 235 Homeobox Transcription Factor Family AT4G37790 64.331 9.31e-63 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Eupl09g00985 Homeodomain 4.5e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00985 K09338 - msin:131257582 268.855