Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00978 ATGGTAGGGTTTGAAGTTGGTCTTGTTCCATTTAATAATGACGGCTGGGGTTCGCCGGAAACACCAGCTCCGCTCCTCTCCAACCACCCCACCAACGTCCCATTCGCCCCATTCAACCGGTCCGAGAAGCTCGGCCGCATCGCCGATTGGACCCGAAACTACAACAACCCCTCTCGCAACACCAACCCTCGCAACCCCTCCGACGCCGTCTTCGACTTCGCCCTCGACGACTCCTCCGCCGCTCTCGCTGCCGATGACGACTCCTCCTTCCGCCTCGTTGACGGTAAGCCCCCTCCACGCCCAAAGTTCGGCCCCAAGTGGCGCTTCCAGCAACAGCGCCAACTCCCCCAACGCCGCGACGAAGAAGTCGAAGCCCGGAAGCGAGAAGCCGAGAAGGAGCGGGCCCGCCGCGACCGCCTCTACAACCTCAACCGATCGGGCGGCAACAACCCCCGCCGTGAAGCCGCTGTCTTCAAATCCTCCGTTGACATCCAGCCGGAATGGACCATGCTCGATCAAATCCCCTTCTCCACCTTCTCCAAGCTCTCTTTCTCCGTTCCCGACCCCGAAGACCTCCTCGTCTGCGGCAGTCTCGAGTCCTACGACCGCTCCTACGATCGCGTCAACCCTAAGAACGAAAAACGCCTCGAGCGATTCAAAAATCGCAACTTCTTTAAAGTCACCACTACCGATGATCCCATCATCCGTCGCCTTGCCAATGAGGATAGAGCTACTGTTTTTGCCACTGATTCGATTCTCTCCACTCTTATGTGCGCTCCGAGATCGGTTTACTCTTGGGATATCGTGATTCAGCGAGTCGGGAACAAGTTGTTTTTCGATAAAAGAGATGGGTCGCAGCTTGATCTGCTATCCGTTAACGAGACCTCACAGGAGCCATTGCCCGAAGCCAAGGAAGATATCAATTCGGCATATTCCTTGAGTGTCGAAGCGGCTTATATTAACCAGAATTTCTCTCAGCAGGTTTTGGTTAGGGATGGGAATAAAGTGACGTTTGAGGAGCCGAATCCGTTTGCTGCTGAAGGGGAAGAGGTTGCTTCGGTTGCTTACAGGTACCGGCGGTGGAAGCTTGATGATGACATGTATCTTGTCGCTCGGTGTGAGGTTCAGAGTGCGTCTGAAGTGAAAGGGCAGCGGTCGTTCTTGACCTTGAATGCTCTTAATGAGTTTGATCCAAAGTACTCGGGGGTTGATTGGAGGCAGAAGCTGGAGACACAAAGAGGGGCAGTCTTGGCTACAGAGCTTAAGAACAATGCAAACAAGTTGGCCAAGTGGACTGCTCAAGCACTGTTGGCAAGCGCGGATGTGATGAAGTTGGGGTATGTTTCGAGGGTTCATCCCCGTGATCACTTTAACCATGTCATCTTAGCTGTGGTCGGGTATAAGCCAAGGGAGTTCGCGACACAGATCAATCTAAATACTTCAAATATGTGGGGAATTGTGAAGTCTATTGTTGATTTGTGCATGAAATTGAATGAGGGGAAATATGTTCTAGTGAAGGACCCGTCAAAGCCGCAAGTAAGGATTTATGAGGTCCCTGCAGATGCATTCGAGAATGATTATGTGGAGGAGCCATTGCCAGAGGACGAACAAGTGCAGCCGCCTGCTGAAGAAGATGCCAATGGTGGGGAGGCTATTGTATCTGTGAATGATGGGGTAGAGAAGGAAGTTGAGGCTGAGGTTTGA 1704 0.5276 MVGFEVGLVPFNNDGWGSPETPAPLLSNHPTNVPFAPFNRSEKLGRIADWTRNYNNPSRNTNPRNPSDAVFDFALDDSSAALAADDDSSFRLVDGKPPPRPKFGPKWRFQQQRQLPQRRDEEVEARKREAEKERARRDRLYNLNRSGGNNPRREAAVFKSSVDIQPEWTMLDQIPFSTFSKLSFSVPDPEDLLVCGSLESYDRSYDRVNPKNEKRLERFKNRNFFKVTTTDDPIIRRLANEDRATVFATDSILSTLMCAPRSVYSWDIVIQRVGNKLFFDKRDGSQLDLLSVNETSQEPLPEAKEDINSAYSLSVEAAYINQNFSQQVLVRDGNKVTFEEPNPFAAEGEEVASVAYRYRRWKLDDDMYLVARCEVQSASEVKGQRSFLTLNALNEFDPKYSGVDWRQKLETQRGAVLATELKNNANKLAKWTAQALLASADVMKLGYVSRVHPRDHFNHVILAVVGYKPREFATQINLNTSNMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDYVEEPLPEDEQVQPPAEEDANGGEAIVSVNDGVEKEVEAEV* 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00978 567 Hamap Eukaryotic translation initiation factor 3 subunit D [EIF3D]. 2 529 IPR007783 GO:0003743|GO:0005737|GO:0005852
Eupl09g00978 567 MobiDBLite consensus disorder prediction 89 136 - -
Eupl09g00978 567 MobiDBLite consensus disorder prediction 113 136 - -
Eupl09g00978 567 MobiDBLite consensus disorder prediction 530 567 - -
Eupl09g00978 567 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 7 3 540 IPR007783 GO:0003743|GO:0005737|GO:0005852
Eupl09g00978 567 Coils Coil 118 138 - -
Eupl09g00978 567 Pfam Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) 8 517 IPR007783 GO:0003743|GO:0005737|GO:0005852
Eupl09g00978 567 PIRSF Transl_init_eIF3d 1 547 IPR007783 GO:0003743|GO:0005737|GO:0005852
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00978 Eupl-Chr9 19953884 19959489 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00978 3 562 Eukaryotic Initiation Factors Gene Family AT4G20980 75.387 0.0 884
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00978 K03251 - nnu:104599405 1008.44