Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00973 ATGGCGGTCGACCTTCTAGGATTTTCGAAGATGGACGAGCAGATTGCAATTCAAGAAGCTGCGACAGCGGGATTGAGAAGCATGGAACATCTGATCCGTATGTTATCTCATCAAAGCCAGCAAAATCAGCAACTAAACCAGTTGGATTGCAGCGAAATCACCGATTTCACGGTATCCAAGTTTAAGAAGGTAATTTCGATCTTGAATCGAACCGGCCACGCTCGGTTTCGTCGCGGTCCCTCTTTTTCATCTTCTTCATATACGGCCCTACAATCTCAAACCCTAACCCCAACACCGACTCCAAATACGGCTTCGGTTGTTCAATCACAACCTCAATCCCTTACGCTTGATTTCACAAAACCTAATCTGCTCAAATCTAACCCTAATCCTAGCGAAGTCTCGACGAGTCAGTTCACCAAGGACAGCTTCAGCATCTCTCCTCCGATCTCCTCTGCTACTTCCTCGTTCATGTCTTCGATCACGGGAGACGGTAGCATCTCTAACGGGAAACAGGGATCATCGATCTTCGTAGCTCCGGCGCCGACTGTATCCGCCGGGAAGCCGCCTCTCTCCTCATCTTACCGTAAAAAATGCCACGAACATAGTCACTCCGAAGTGTCCGGCAAGTACACTGTTTCCGGCGGCCGCTGCCATTGCTCCAAGAGAAGGAAATCTCGAGTTAAGAGGACAATTAGAGTCCCGGCGATAAGTTCGAAGATGGCCGATATCCCTCCCGATGAGTACTCATGGAGAAAATACGGTCAAAAACCGATCAAGGGATCACCTTTTCCACGAGGGTATTATAAGTGTAGTACCTTGAGAGGCTGTCCGGCGAGAAAACACGTAGAGCGGGCCCCAGACGATCCAACGATGCTAATCGTAACTTACGAAGGAGAGCACCGCCACTCGCAACCTCCATTGCCGGAGACCGTCGCCGGAGGAGTAGGATCTATAATGTTCGAGTCATCGTGA 972 0.4979 MAVDLLGFSKMDEQIAIQEAATAGLRSMEHLIRMLSHQSQQNQQLNQLDCSEITDFTVSKFKKVISILNRTGHARFRRGPSFSSSSYTALQSQTLTPTPTPNTASVVQSQPQSLTLDFTKPNLLKSNPNPSEVSTSQFTKDSFSISPPISSATSSFMSSITGDGSISNGKQGSSIFVAPAPTVSAGKPPLSSSYRKKCHEHSHSEVSGKYTVSGGRCHCSKRRKSRVKRTIRVPAISSKMADIPPDEYSWRKYGQKPIKGSPFPRGYYKCSTLRGCPARKHVERAPDDPTMLIVTYEGEHRHSQPPLPETVAGGVGSIMFESS* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00973 323 ProSiteProfiles WRKY domain profile. 239 305 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl09g00973 323 SMART WRKY_cls 244 304 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl09g00973 323 Pfam Plant zinc cluster domain 195 242 IPR018872 -
Eupl09g00973 323 SUPERFAMILY WRKY DNA-binding domain 242 305 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl09g00973 323 Gene3D WRKY domain 230 306 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl09g00973 323 MobiDBLite consensus disorder prediction 79 140 - -
Eupl09g00973 323 Pfam WRKY DNA -binding domain 246 302 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl09g00973 323 FunFam WRKY transcription factor 65 228 305 - -
Eupl09g00973 323 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 14 307 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00973 Eupl-Chr9 19886086 19888832 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00973 1 323 WRKY Transcription Factor Family AT2G24570 60.479 1.48e-123 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Eupl09g00973 WRKY 8.8e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00973 - - tss:122662681 464.922