Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00957 ATGTCCAGGCCCTGGACTTGCGCAGCTTGCCAATTCTGTGAAAATAAATGTCCTGAAGATTGCTTTTTCGCCCCTTATTTCCCACCAAACAGTCCACAGAGATTTGCCTCTATTCACCAAGTCTATGGTGCCGGCAACTTTAAGAAGATTTTACAGGAAGTACCAAGCCGTCAACGTGCAGAGGCAGCGGAATCCATGATTTACGAGGCAAGCATGCGAGTTCGAGACCCGGTTTATGGGTGTGTTCGGATTATCTCTCACTTACAACAACAGATAAATATGTTTAATCGTGAACTTGCAAAGACACAAGGTGAAATTGCCGAATACAGAGCAGCTCAACCAGCCGAACAAGAACAGCAAATGACGACAGCCCAAGTTCTGCAGGGCGAACCCTCATGCGTCAATGAAACTCAACAAGATCTCGTTTACTTGGATCATCAACAACAGATAAAACTGTTTAAACGTGAACTTGCAAAGACACAAGGTGAAATTGCCAATCACAGAGCAGCTCAACCAGCCGAACAAGAACAGCAAATGACGACAGCCCAAGTTCAGCAGGGCGAACCCTCGTGCGTCAATGAAACTCAACAAGATCTCGTTTACTTGGATCATCAACAACAGATAAAACTGTTTAAACGTGAACTTGCAAAGACACATGGTGAAATTGCCAATCACAGAGCAGCTCAACCAGCCGAGCAAGAACAGCAAATGACGACAGCCCAAGTTCAGCAGGGCGAACCCTCATGCGTCAATGAAACTCAACAAGATCTCGTTCACTTGGATCATCAACAACCCTGGTGA 801 0.4569 MSRPWTCAACQFCENKCPEDCFFAPYFPPNSPQRFASIHQVYGAGNFKKILQEVPSRQRAEAAESMIYEASMRVRDPVYGCVRIISHLQQQINMFNRELAKTQGEIAEYRAAQPAEQEQQMTTAQVLQGEPSCVNETQQDLVYLDHQQQIKLFKRELAKTQGEIANHRAAQPAEQEQQMTTAQVQQGEPSCVNETQQDLVYLDHQQQIKLFKRELAKTHGEIANHRAAQPAEQEQQMTTAQVQQGEPSCVNETQQDLVHLDHQQPW* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00957 266 MobiDBLite consensus disorder prediction 229 252 - -
Eupl09g00957 266 MobiDBLite consensus disorder prediction 226 252 - -
Eupl09g00957 266 Pfam Lateral organ boundaries (LOB) domain 7 103 IPR004883 -
Eupl09g00957 266 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 6 124 - -
Eupl09g00957 266 Coils Coil 150 170 - -
Eupl09g00957 266 ProSiteProfiles LOB domain profile. 5 106 IPR004883 -
Eupl09g00957 266 Coils Coil 85 112 - -
Eupl09g00957 266 ProSitePatterns 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 7 18 IPR017900 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00957 Eupl-Chr9 19697322 19698630 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00957 4 107 AS2 family AT3G26660 58.654 2.33e-42 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Eupl09g00957 LOB 6.4e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00957 - - ming:122093931 159.458