Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00956 ATGGAAGTCAGGTTAGTACCAATCGGTCAACGTGCACAGGCAGCGGAATGCATGTTTTATGAGGCAAATGTGAGAATTAACGACCCGATTTCTGGGTGTGCTGGGATAATGTCACAATTACGACAACAGACAACTATGTTTGAACGTGAACTTGCAATGACACAAGGTGAAATTGCCTACTACAGAGCTCAACTAGACCAACAACAACATACGGCTCGAACCCAAGTTCAGCAGGGCGAAGCCTCATGGTTCAATGCAACTCAACACGATCTCCTTCACTTGGATCAACAAGCCGCGGGATAA 303 0.462 MEVRLVPIGQRAQAAECMFYEANVRINDPISGCAGIMSQLRQQTTMFERELAMTQGEIAYYRAQLDQQQHTARTQVQQGEASWFNATQHDLLHLDQQAAG* 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00956 100 Pfam Lateral organ boundaries (LOB) domain 6 55 IPR004883 -
Eupl09g00956 100 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 6 80 - -
Eupl09g00956 100 ProSiteProfiles LOB domain profile. 1 58 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00956 Eupl-Chr9 19693197 19697196 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00956 6 71 AS2 family AT3G26660 40.909 3.33e-12 56.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Eupl09g00956 LOB 1.2e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00956 - - egr:108955796 72.0182