Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00955 ATGAGCAATTCAAGAGACTCGCCATACCGTCGGTATCGTCAGGACGAGGAGACAGGCCACAGCAACCATGAACGGAACCGTGAAGACAATGATGAAATCTCTTCTGACCCGTTCGACATTCCCAACACTAAGAACGCTTCCCTTGAGAGGCTCAAGCGATGGAGACAAGCAGCACTTGTGCTAAATGCTTCTCGTCGGTTTCGGTACACTTTGGACTTGAAAAAGGAAGAAGAGAAAGAGCAAATAAGGAAGAAGATTAGAACACATGCACAAGTCATACGAGCAGCACTTCTTTTTAAAGAGGCTGGGGAACGAGCCAATGTGGCAGGTCCTGCTAAACCTCCAACTTTCAGTGGTGGTGATTATGCAATTGGACAAGAGCAACTTGCTTCAATAACAAGGGATCATGACTTCACTGCTTTAGAACAACATGAGGGGGTTATAGGGCTATCAAATTTGTTAAAAACAAACCCAGATAAGGGAATTAGTGGAGATGATGCTGATTTACTAAGTAGGAGGAACACATTTGGATCAAATACATATCCTCGAAAAAAAGGGCGGAGCTTTTGGATGTTCTTGTGGGAAGCTTGGCAAGACTTGACCCTTATCATCTTGATGATAGCTGCAGCGGCATCTTTGGCGCTAGGAATAAAGACAGAGGGTATTAAATCAGGGTGGTATGATGGGGCGAGCATTGCCTTTGCTGTCCTTCTTGTTATAGTTGTTACAGCTATCAGTGATTATCGACAATCCCTTCAGTTTCAAAATTTAAATGATGAGAAGCGAAATATACATGTGGAGGCCATTAGAGGTGGTAGAAGAGTCCAGATTTCCATATTTGATATTGTTGTTGGTGATGTTTTACCTCTAAAAATTGGTGATCAGGTCCCTGCTGATGGAATTTTAATTGTTGGTCACTCTCTTGCCATTGACGAATCTAGCATGACTGGGGAGAGCAAGATTGTTCACAAGGATCAGAAGAAACCATTTTTGATGTCCGGATGCAAAGTGGCTGATGGTTATGGTACCATGCTGGTAACTGGTGTTGGAATAAATACTGAATGGGGATTGCTGATGGCCAGTATAACAGAGGATACTGGTGAAGAAACCCCCTTGCAGGTGCGCTTGAATGGTGTTGCAACTTTTATTGGCATAGTTGGACTCCTAGTGGCTCTTCTTGTGCTGGTTGTGCTTTTGGCCAGATACTTTACTGGAAATACCAGAGATACGAGTGGAAATCCTCTATTTATTAAGGGGAAGACAAGTGTTAGTAATGCAGTAGATGGAGCTATTAAAATCGTCACTGTTGCGGTCACTATTGTGGTTGTTGCAGTGCCTGAAGGGCTTCCTTTGGCAGTTACCTTGACGCTCGCTTACTCGATGCGGAAGATGATGGCAGACAAGGCTTTGGTGCGGAGGCTTTCAGCCTGTGAAACTATGGGCTCAGCCACCACAATTTGCAGTGATAAGACTGGAACATTGACATTGAATCAGATGACAGTGGTTGAGGCATATATTGGTGGGAAAAAGATAGATCCACCAAATAACACCACACTGTTGTCTCCTACTGCATCCTCTCTTCTTCTTGAAGGCATTGCTCAAAATACCACGGGCAGTGTTTTTACGCCTGAGAGTGGTGGAGAATTAGAGGTTGCTGGATCACCAACGGAAAAAGCCATCCTTTCTTGGGGGGTCAAGCTCGGTATGAAATTTGATTATGTGAGATCAGAGGCTTCAGTTCTTCATGTTTTCCCTTTCAACTCAGAGAAAAAGAGAGGTGGTGTTGCGCTACGACTGCCTGACTCTCAAGTTCATATACATTGGAAAGGTGCTGCTGAATTAGTCCTAGCCTCATGTACAAGTTACCTTGACTCAGATGGTAGCATCAAACCAATGGAGGAAGATAAGGTAATATATTTCAAGAAAGCTATTAATGATATGGCGGCAAGTAGCTTGCGCTGTGTTGCTATTGCGTACAGATCATTTGAACTAGAGAAAGTTCCAAAGGATGAAGAGCAACTGGAACAATGGGTGTTACCTGATGACGACCTAGTTTTGGTGGCTATTGTGGGGTTAAAGGATCCTTGCCGACCAGGTGTCAAGGAGGCTGTACAACTGTGCACAAATGCTGGTGTCAAGGTACGCATGGTCACTGGAGACAATCTTCAGACAGCCAAAGCAATAGCTTTGGAGTGTGGGATACTTGGTTTGGACCCAGCTGATGCTACCTCGCCAAATCTCATTGAAGGAAGGGAATTTCGCGCCTTGTCTGATAAAGAAAGAGCAGAAGTTGTCGACAAAATATCGGTAATGGGAAGGTCTTCTCCTAATGATAAGCTTCTACTTGTGAGAGCTCTGAGGAATAAAGGCCATGTTGTTGCTGTAACTGGAGATGGCACTAATGATGCTCCTGCACTGCATGAGGCAGATATAGGTCTTGCCATGGGCATCCAAGGAACTGAAGTTGCAAAAGAAAGCTCGGACATCATCATCTTGGATGATAATTTTGCTTCAGTTGTGAAGGTTGTCCGCTGGGGGCGGTCTGTATATGCAAATATCCAAAAATTTATCCAGTTCCAGCTCACCGTTAATGTTGCAGCTCTTATTATTAATGTTGTGGCTGCTGTGTCCTCTGGCAGTGTTCCTTTAACTGCAGTGCAGCTTCTCTGGGTTAATCTCATCATGGATACTCTTGGAGCACTTGCGTTGGCCACTGAACCACCAACGGATCACCTTATGCAGAGACATCCAGTTGGTCGAAGGGAACCTCTCATTACAAATATCATGTGGAGGAACTTAATTGTACAGGCTCTATATCAAGTTAGCGTCCTACTTCTCCTCAATTTCCGGGGTAGGAGTATTCTGCAGTTAAAGACCGACAACACCGACCATGCTATCAAAGTGAAGAATACCTTTATATTCAACACGTTTGTCCTCTGTCAAATATTCAATGAGTTCAATGCTCGAAAGCCAGATGAAATAAATGTCTTTCGGGGAGTAACGAAAAACCGCCTCTTCATAGGGATAGTTGGAATCACTCTTGTACTTCAGGTCATGATCATTATGTTTCTTGGAAAGTTTACCACAACGGTTAGACTCAGTTGGAAACTATGGCTTGTTTCCATTGCTATTGCTAGTCTCAGCTGGCCTCTTGCAATTCTTGGGAAACTCATACCGGTCCCTGAAACTCCCTTTAGTGAGTACTTTACGAGGCTAGTTCCCCGACGTCGAGCTTCTCATAGTTCAAGGAAGAGGGGGGAGGAGGATTCACAGCTGCAAGATCAGCACTGA 3291 0.443 MSNSRDSPYRRYRQDEETGHSNHERNREDNDEISSDPFDIPNTKNASLERLKRWRQAALVLNASRRFRYTLDLKKEEEKEQIRKKIRTHAQVIRAALLFKEAGERANVAGPAKPPTFSGGDYAIGQEQLASITRDHDFTALEQHEGVIGLSNLLKTNPDKGISGDDADLLSRRNTFGSNTYPRKKGRSFWMFLWEAWQDLTLIILMIAAAASLALGIKTEGIKSGWYDGASIAFAVLLVIVVTAISDYRQSLQFQNLNDEKRNIHVEAIRGGRRVQISIFDIVVGDVLPLKIGDQVPADGILIVGHSLAIDESSMTGESKIVHKDQKKPFLMSGCKVADGYGTMLVTGVGINTEWGLLMASITEDTGEETPLQVRLNGVATFIGIVGLLVALLVLVVLLARYFTGNTRDTSGNPLFIKGKTSVSNAVDGAIKIVTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYIGGKKIDPPNNTTLLSPTASSLLLEGIAQNTTGSVFTPESGGELEVAGSPTEKAILSWGVKLGMKFDYVRSEASVLHVFPFNSEKKRGGVALRLPDSQVHIHWKGAAELVLASCTSYLDSDGSIKPMEEDKVIYFKKAINDMAASSLRCVAIAYRSFELEKVPKDEEQLEQWVLPDDDLVLVAIVGLKDPCRPGVKEAVQLCTNAGVKVRMVTGDNLQTAKAIALECGILGLDPADATSPNLIEGREFRALSDKERAEVVDKISVMGRSSPNDKLLLVRALRNKGHVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALIINVVAAVSSGSVPLTAVQLLWVNLIMDTLGALALATEPPTDHLMQRHPVGRREPLITNIMWRNLIVQALYQVSVLLLLNFRGRSILQLKTDNTDHAIKVKNTFIFNTFVLCQIFNEFNARKPDEINVFRGVTKNRLFIGIVGITLVLQVMIIMFLGKFTTTVRLSWKLWLVSIAIASLSWPLAILGKLIPVPETPFSEYFTRLVPRRRASHSSRKRGEEDSQLQDQH* 1097
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00955 1096 SMART Cation_ATPase_N_a_2 137 217 IPR004014 -
Eupl09g00955 1096 Gene3D - 169 363 - -
Eupl09g00955 1096 FunFam Calcium-transporting ATPase 46 102 - -
Eupl09g00955 1096 SUPERFAMILY Calcium ATPase, transduction domain A 265 360 IPR008250 -
Eupl09g00955 1096 FunFam Calcium-transporting ATPase 9 plasma membrane-type 341 511 - -
Eupl09g00955 1096 FunFam Calcium-transporting ATPase 195 252 - -
Eupl09g00955 1096 Pfam haloacid dehalogenase-like hydrolase 484 810 - -
Eupl09g00955 1096 FunFam Calcium-transporting ATPase 813 1062 - -
Eupl09g00955 1096 SUPERFAMILY Calcium ATPase, transmembrane domain M 149 1060 IPR023298 -
Eupl09g00955 1096 FunFam Calcium-transporting ATPase 688 841 - -
Eupl09g00955 1096 PANTHER CATION TRANSPORTING ATPASE 87 1061 - -
Eupl09g00955 1096 FunFam Calcium-transporting ATPase 242 363 - -
Eupl09g00955 1096 FunFam Calcium-transporting ATPase 497 695 - -
Eupl09g00955 1096 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 494 692 IPR023299 GO:0000166
Eupl09g00955 1096 Pfam Cation transporting ATPase, C-terminus 881 1058 IPR006068 -
Eupl09g00955 1096 Pfam Ca2+-ATPase N terminal autoinhibitory domain 35 78 IPR024750 GO:0005516
Eupl09g00955 1096 Gene3D - 497 695 IPR023299 GO:0000166
Eupl09g00955 1096 Pfam Cation transporter/ATPase, N-terminus 144 212 IPR004014 -
Eupl09g00955 1096 PRINTS Sodium/potassium-transporting ATPase signature 480 501 - -
Eupl09g00955 1096 PRINTS Sodium/potassium-transporting ATPase signature 606 624 - -
Eupl09g00955 1096 PRINTS Sodium/potassium-transporting ATPase signature 230 250 - -
Eupl09g00955 1096 NCBIfam HAD-IC family P-type ATPase 763 883 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Eupl09g00955 1096 NCBIfam HAD-IC family P-type ATPase 423 514 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Eupl09g00955 1096 ProSitePatterns E1-E2 ATPases phosphorylation site. 489 495 IPR018303 -
Eupl09g00955 1096 MobiDBLite consensus disorder prediction 1 41 - -
Eupl09g00955 1096 PRINTS P-type cation-transporting ATPase superfamily signature 311 325 - -
Eupl09g00955 1096 PRINTS P-type cation-transporting ATPase superfamily signature 487 501 - -
Eupl09g00955 1096 PRINTS P-type cation-transporting ATPase superfamily signature 820 832 - -
Eupl09g00955 1096 PRINTS P-type cation-transporting ATPase superfamily signature 710 720 - -
Eupl09g00955 1096 PRINTS P-type cation-transporting ATPase superfamily signature 796 815 - -
Eupl09g00955 1096 PRINTS P-type cation-transporting ATPase superfamily signature 688 699 - -
Eupl09g00955 1096 Pfam E1-E2 ATPase 265 465 - -
Eupl09g00955 1096 Gene3D - 484 841 IPR023214 -
Eupl09g00955 1096 NCBIfam calcium-translocating P-type ATPase, PMCA-type 138 1060 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Eupl09g00955 1096 SFLD p-type atpase 469 848 IPR044492 -
Eupl09g00955 1096 SUPERFAMILY HAD-like 485 901 IPR036412 -
Eupl09g00955 1096 Gene3D - 46 102 - -
Eupl09g00955 1096 SFLD C1.7: P-type atpase like 469 848 - -
Eupl09g00955 1096 CDD P-type_ATPase_Ca_PMCA-like 169 929 - -
Eupl09g00955 1096 Gene3D - 195 1048 - -
Eupl09g00955 1096 MobiDBLite consensus disorder prediction 8 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00955 Eupl-Chr9 19609561 19661405 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00955 5 1066 Primary Pumps ATPases AT5G57110 72.889 0.0 1574
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00955 K01537 - nnu:104611393 1670.6