Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00937 ATGGAAAACATAGGCGAGGATTATAATCATTATTGGGAAACCAAAATGTTTTTCCAGAATGAAGAACTTGACAGGGTGTATTCTGATTCAAGCAGTTGGGGGTTGGACGAGGCGTTTTCCGGGGGTTACTACGATTCGAGCTCGCCGGACGGCGCGGCGTCTTCTGTCGCGGCGAAGAACATAATTTCGGAAAGAAACAGGAGGAAGAAGCTCAATGATAAGCTCTTTGCACTTAGATCAGTGGTTCCTAAGATTAGCAAGATGGATAAGGCCTCGATAATCAAGGACGCGATCGATTACATTCAAGATCTACATGAACAAGAGAGTCTGATTAAAGCCGAGATAACGGAACTCGAATCGGGGAAATTGAAGAACCCCATTTCGAATATCGATCATGAAAACACAGTTCTTTCGCGAGCTAAGAAAAAGCGAACTGAACATAGCTGCGACTCGAGCGGATCAAGAACGTCTACGATTGAAATTGACGAACTTAGGGTCTCATATGTGGGAGAGAGGAATTTGGTAGTAAGCTTGACATGTAGCAAGAAAACTGATACCATGGTAAAGCTTTGTGAGGTTTTTGAGTCTTTGAAGCTCAAAATCATTACAGCCAACATCACTGCTTTCTCAGGGAGGCTACTCAAGACGGTCTTTGTTGAGGTATTTCTTTCTCTTCTTTCTTTTTATTATTTTTCTTTGTTAAATTACTACAATACCCTCCTCCTTCAGACAAACCCTCGTCCAGACAAACCTTCCTGA 759 0.4256 MENIGEDYNHYWETKMFFQNEELDRVYSDSSSWGLDEAFSGGYYDSSSPDGAASSVAAKNIISERNRRKKLNDKLFALRSVVPKISKMDKASIIKDAIDYIQDLHEQESLIKAEITELESGKLKNPISNIDHENTVLSRAKKKRTEHSCDSSGSRTSTIEIDELRVSYVGERNLVVSLTCSKKTDTMVKLCEVFESLKLKIITANITAFSGRLLKTVFVEVFLSLLSFYYFSLLNYYNTLLLQTNPRPDKPS* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00937 252 SMART finulus 61 110 IPR011598 GO:0046983
Eupl09g00937 252 Pfam Helix-loop-helix DNA-binding domain 60 104 IPR011598 GO:0046983
Eupl09g00937 252 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 56 119 IPR036638 GO:0046983
Eupl09g00937 252 Gene3D - 53 121 IPR036638 GO:0046983
Eupl09g00937 252 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 55 104 IPR011598 GO:0046983
Eupl09g00937 252 FunFam Basic helix-loop-helix (BHLH) DNA-binding superfamily protein 52 124 - -
Eupl09g00937 252 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 48 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00937 Eupl-Chr9 19281894 19285313 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00937 1 225 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G57150 55.752 2.59e-78 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Eupl09g00937 HLH 3.1e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00937 - - zju:107421731 310.071