Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00934 ATGTGGACAGGGAAGGCGCTTGAGAAGGAGAGGCAGAGCGAATATAGCTATGCGAAGCGGTCGTCTTCTTTTCCATCTCAAATACCGCTTTTCCTCCGAAACCACAAACTTCTAAAACCATTCCTGTTTTCTCAAAACCGTTTTTCTCGCTCCCTCATCTCTCTCTCTCTGGATCTCTTTAATATATATACGCCTCCATCTCTCTCTCTATCTTTCGAAAGCAAAACTCTAGAATCTATCTACTGGTTTACCGGCGATCTTTTTGCCGCATTCTGGCCGGGATCTCTCTGGAATTCGGCCGGAAAACTGCCGTCAAGAAGGATTTTAGAGATGAAAGCGAGGGTTTGCGAGCTCTGTAATGGAGAAGCTTCGTTGTACTGTGCGTCGGACTCGGCTTTTCTGTGTTGGAACTGCGATGCTAGGGTTCACGAGGCGAATTTCTTGGTAGCTCGCCATGTTCGCCGGACTGTTTGTTCCAAATGTAAAGGATTCGATGGGAATCGCATTTCCGGAGTCGGATTCCGTCCTCTCCGACCGATATGCCGATCTTGTTCATCAGAATCCGACGATGATGATTTCAGTTCATTATCTTCGTGTTCATCGTCTGCTTGTATCTCCAGCGCGGAATCCTTCGTTGCTGTTGCACCGAAGACGAAGAAGATCGATTTTGATCGACGAGGACCTGCGAAGATCGCATGTTCCAGCTCTGTTACAGATATTTCCGCTGAGGATTCTAGTATTCCGTCTAAGCTCTCCGGCGAAGTTTCATCGAAGAAGAAAAGGAGAGAGAGAACAACGAGATCGCGAGTTCCGGCGAACGTGGACGTGAAGGCGGAGGGCATTTTGGTAAATTGGTGCAGAAAACTGGGGCTAAAAAGTAGCTGCTCTATTCCTCTCGCCTCCCACGCATTCTCTGTGTGCGTGCAGAAATTGACAGCTTTGCCCTTTCGGCTCTCCCTCGTTGCATCCATCTGGTTCTCGTTCAAGCTCAGCGAGGGACCATCAACATCAACGTGTCACAATCTCAAGAGGCTTGAGGAAATCTCTGGCGTACCAGTTAAACTGATCTTATTGGCCGAATCGAAGCTCTCTCGTGTTCTAAAGATCAACAGCAAATCTCAACGTGATCAAGAGGAAGGTTGGGCTGAGTGCTCCGATTGA 1161 0.4823 MWTGKALEKERQSEYSYAKRSSSFPSQIPLFLRNHKLLKPFLFSQNRFSRSLISLSLDLFNIYTPPSLSLSFESKTLESIYWFTGDLFAAFWPGSLWNSAGKLPSRRILEMKARVCELCNGEASLYCASDSAFLCWNCDARVHEANFLVARHVRRTVCSKCKGFDGNRISGVGFRPLRPICRSCSSESDDDDFSSLSSCSSSACISSAESFVAVAPKTKKIDFDRRGPAKIACSSSVTDISAEDSSIPSKLSGEVSSKKKRRERTTRSRVPANVDVKAEGILVNWCRKLGLKSSCSIPLASHAFSVCVQKLTALPFRLSLVASIWFSFKLSEGPSTSTCHNLKRLEEISGVPVKLILLAESKLSRVLKINSKSQRDQEEGWAECSD* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00934 386 ProSiteProfiles Zinc finger B-box type profile. 111 157 IPR000315 GO:0008270
Eupl09g00934 386 SMART bboxneu5 111 157 IPR000315 GO:0008270
Eupl09g00934 386 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 115 359 - -
Eupl09g00934 386 CDD Bbox1_BBX-like 115 157 - -
Eupl09g00934 386 Pfam B-box zinc finger 112 152 IPR000315 GO:0008270
Eupl09g00934 386 MobiDBLite consensus disorder prediction 244 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00934 Eupl-Chr9 19241180 19242420 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00934 111 184 C2C2-CO-like Transcription Factor Family AT5G54470 50.000 1.98e-18 81.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Eupl09g00934 zf-B_box 4.7e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00934 - - nnu:104609079 357.836