Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00921 ATGTCTTCGTGTTTAAGCGGAGGTGGTCGGACTTATGGATTCGATCTTGATATCGTGAAATCCCCATCTACCTCGACCCGAACGTCGCATTCGTCTTCTCCGTCCTCCACTCTGTCTGAATCGAGCAACACTCCAATTGCACTCTCGACACGAAAACCACGAACACCTCGAAAGCGTCCGAACCAAACATACAATGAAGCTGCGGCGCTCCTCTCCACAATCTATCCCAACATCTTCTCTACCAAAAACCTCAGAAAACCTTGCAAGCACTCCAAGCCTTATGACTCTTTCTCCGCCGAATCCTCCGAATTGCTTCCACCATTTCCAGCCTTCCACAATGCAGAATTCCTACTCCATCAACCAATCCCCCCAAAACCAGTCTTTTCGATCGAGTCTAAACCCGCGAATTCTAGTGAAAAACCATGTCAAAGTCCCACAACTGATAACGATTTTCAAGTGAATTCTTCAAGCCCATGTGACACTTACGAAGAGGATTTCGACGCGGAATCGATCCTCGATGAGGAGATGGAAGAGGGAATCGACAGCATCATGGGGAATCTCAGTGTTAACAACGATTCGTCATACGAAGACTCCAATGCTTCTTGTTACAGTGGCCAAATCAATCCTTACTATGGAAATCCAATGGGGTTGGGTTTTGGCGGGAAATTCGATTTCGGGTTTGGAATATGTGGGAGAGTGAGAGCATTGAGACACGTGGATGATGGTGATTGGTGGAGGTTCCCGACTGTTGATGTTCTTGACATCTCTCCCAAATTCAACAAAGTTTCATCGGAGAAGAAGAAGAAAAAGGTTGAAAGAGAAGAAGAATTGAAGACCAATTCGAGTTCGAGTTCGAGTTCGGATTCGGGTCTGTGCCTGAAATTGAATTACGAGGAAGTTTTGATGGCTTGGTCCGATCGTGGGTCACCTTTTTCTGATGACTTTCCGGGGACTGAGTGGTCGGAATCTGACGCCATTGCCAGGCTCGCGCAAATTGATTTGTTTTCAGAGAACGGAGGGGTGAGAGAAGCTAGCGTGCTGCGCTACAGGGAGAAACGTAGGAGTCGCCTTTTCTCTAAGAAGATCAGATACCAGGTTCGTAAAGTCAACGCTGATCGACGGCCCAGGATGAAGGCAAGTAAGACTTATTTTTTATTTTTTTATATAAAGTTTATAAGTATTATAGACGGGAAACTACCGTGTATAAGAATCATTTTTTTATTCTTGGAGCTGTGTGCTTGGCACACTCTTTGGGGCCCACCAAGAGGTGGACCAAACATCCATAAGGTCAGCAGGCCCCAAAGCATCCTCTACTTAGCATTTTTGGGAGGGGAAACTTCAAATTTTGAAGTATCCGAGGTGCAGCGAATATTTTCTCCTCTTAGGTCCTCTCTGACATTGTTATCATTGAAAACCGGTCCAATAGATGGCACCCATGATCTCTAA 1446 0.4571 MSSCLSGGGRTYGFDLDIVKSPSTSTRTSHSSSPSSTLSESSNTPIALSTRKPRTPRKRPNQTYNEAAALLSTIYPNIFSTKNLRKPCKHSKPYDSFSAESSELLPPFPAFHNAEFLLHQPIPPKPVFSIESKPANSSEKPCQSPTTDNDFQVNSSSPCDTYEEDFDAESILDEEMEEGIDSIMGNLSVNNDSSYEDSNASCYSGQINPYYGNPMGLGFGGKFDFGFGICGRVRALRHVDDGDWWRFPTVDVLDISPKFNKVSSEKKKKKVEREEELKTNSSSSSSSDSGLCLKLNYEEVLMAWSDRGSPFSDDFPGTEWSESDAIARLAQIDLFSENGGVREASVLRYREKRRSRLFSKKIRYQVRKVNADRRPRMKASKTYFLFFYIKFISIIDGKLPCIRIIFLFLELCAWHTLWGPPRGGPNIHKVSRPQSILYLAFLGGETSNFEVSEVQRIFSPLRSSLTLLSLKTGPIDGTHDL* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00921 481 MobiDBLite consensus disorder prediction 264 279 - -
Eupl09g00921 481 ProSiteProfiles CCT domain profile. 342 384 IPR010402 GO:0005515
Eupl09g00921 481 MobiDBLite consensus disorder prediction 264 289 - -
Eupl09g00921 481 Pfam CCT motif 342 378 IPR010402 GO:0005515
Eupl09g00921 481 MobiDBLite consensus disorder prediction 131 161 - -
Eupl09g00921 481 MobiDBLite consensus disorder prediction 20 61 - -
Eupl09g00921 481 MobiDBLite consensus disorder prediction 20 50 - -
Eupl09g00921 481 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 1 379 - -
Eupl09g00921 481 MobiDBLite consensus disorder prediction 129 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00921 Eupl-Chr9 19065980 19070436 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00921 288 379 C2C2-CO-like Transcription Factor Family AT1G68520 44.037 4.61e-17 81.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Eupl09g00921 CCT 8.4e-13 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00921 - - nnu:104609051 498.049