Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00917 ATGCAGAACACTGGTAAGAAATTACACCGCCAAGCATCCGGCAAGTCTTGCTTTTCCAAGAGAGATATTGGGTCCAGAATAAATACCTCATTTCAGAACAAGAATGGTTGCAAAGTATCCTACACCAAGAGATGCAAACCAAAACCAAGGTCTCATGTAAAGACGATTGGTTCAGTCCTGTCAAAGAGAAGGGCATCTGAGTTTTCAAACAATGGAACCAGGAATAATTCTTTTAATGGGAAACCAATTAGAAGAAAAACTCTGCAGAAAGTCTCTGATACCAATTCTTCTGATAAGAAGCTTTCCTCAATGCTTCGAGATGGAAAATCCTCAATTCTTAGCTTTAAAGGACATGGAAAGAATACTGGTGGGGATGTTGGAACTCAAAAGATAGACAAAGGGAGAAAGCGGAAGAGGAGGAAGAAAAATGGGGAGCATGATGAAGCCTCTCGCTTGCAAAGAAGAACAAGGTACCTGCTAATTAAAATGAAGCTGGAACAGAACCTCATTGATGCGTACTCTGGGGAGGGTTGGAAAGGCCAGAGTCGAGAAAAGATTAAGCCAGAAAAGGAATTACAAAGAGCCACGAAGCAGATATTGAAGTGTAAACTTGGAATCCGTGATGCAATTCGCCAGCTGGATTTGCTTAGTTCTGAGGGATGCATTGAAGACTCCGTGCTTGGTCCAGATGGATCTGTTTACCATGAACATATTTTCTGCGCAAAGTGCAAGTTGCGAGATGCTTTTCCAGATAATGACATTATACTGTGTGATGGGACTTGCAATTGTGCTTTCCACCAAAAATGCCTGGAGCCTCCATTAGCTACTGAAAATATTCCTCCAGGAGATCAAGGGTGGTTTTGCAAATTTTGCGAGTGTAAGATGGAAATACTAGAAGCAGTCAATGCACATCTTGGGACCCACTTTTCTGCCAACAGTAATTGGCAAGATATTTTCAAAGACGCAGCTGCAGCGCCTGATGGTGAAAACACATCTCTTAATCCGGGAGACGAATGGCCATCTGATGATTCTGAAGATGATGATTATGACCCAGATATAAATGAAAAGAGCTGCAGCTACAGTAGAGCAGACACTGAAGAGAACATGTCTGACGATGCTAGTAGCTCCAGTAGTTTGTTTTGGACATCAGAAGAAGAAGCTAGTCCTCAAAATGGAAGATCAGGGAATGGTGGTACCTTGAAGGGTGGCTATTACCATGGTAAAAGTAGAAGCAGGGACTCTGATAAGATTAATCTTGTTGACTCGATCATCAGCATAGATTCTGATGATACTACTGATCGTGAAATTACAAGCTGCCGTAGGCAGCGAAGAGATGTAGATTATAAGAAACTGCATGATGAGATGTTTGGCAAGGACGTGCCTGAAAATGAACAAGTTAGTGAAGATGAAGACTGGGGGCCTGGTAGAAGAAAGCGAAGAGGGAAGGAGTCTGACGCAGCCGGCACTCTCGTGGCTTTGTGTGGGCTTGGGGATGGACGTTCAAATGTGATACATATAGAAGCTAAGAATAAACTGCCTTCAGTTTCAGAAGATAAAAAAACACTTTTCAGAATTCCCCCCAATGCAGTTGAGAAACTTCGCAGAGTTTTTGCTGAAAATGAGCTTCCCTCGAGGGCTGTCAGGGAGAATCTTTCAAAGCAGTTGGGTCTTGCATCTGAGAAGGTCAACAAGTGGTTCAAGAATGCCCGTTACACAGCTCTTAAAATTAGAAAGGCAAAAAGCACAAAACAACTCCACACAAGCGTCTCCAAAGAATCGAGTGCTGCAACTAGAAAGAACAGAACTGCTGATCGAGTGGCATCAAATGTTAACTCTTATTTGGTCCCATTAACAACTGGAAGCCAAATACCCAAAAATTTGAGAAAGGTTCATCGGAGAAAGAACCCAAAATCTATGACTGCCCTCTCAAAGAAACAACAAAAAAGAGCCATCGGTGCACTTCCCACCAACATAAATGAGGTGAGTACGTGGCTTAGCAATGCAGTGAGCTTGAAGAAACAAATGACCAGTTTAAAAAGAAAAGCCTCTTTGGAAAAGAAGAGGGTCAACCCCAAGTGTGAAATTGGAACTTCCTATCTGAACGAGACCAAGAACAAGGAGCAGCTATACTTGGTTGAGATGGAGAGACTGTGTTGTCTGGATAATAAGCTTGAAAAGCTGAAGGAGGTGTTATTGAGAATATGCAATGGCAAGAATCATGTATCAGATGAAACCCATTTGGATGAACGGCTTGTGATCTATGTTCCAGTTGCAGAATTAAGGGAAAAAGTGTGA 2295 0.4235 MQNTGKKLHRQASGKSCFSKRDIGSRINTSFQNKNGCKVSYTKRCKPKPRSHVKTIGSVLSKRRASEFSNNGTRNNSFNGKPIRRKTLQKVSDTNSSDKKLSSMLRDGKSSILSFKGHGKNTGGDVGTQKIDKGRKRKRRKKNGEHDEASRLQRRTRYLLIKMKLEQNLIDAYSGEGWKGQSREKIKPEKELQRATKQILKCKLGIRDAIRQLDLLSSEGCIEDSVLGPDGSVYHEHIFCAKCKLRDAFPDNDIILCDGTCNCAFHQKCLEPPLATENIPPGDQGWFCKFCECKMEILEAVNAHLGTHFSANSNWQDIFKDAAAAPDGENTSLNPGDEWPSDDSEDDDYDPDINEKSCSYSRADTEENMSDDASSSSSLFWTSEEEASPQNGRSGNGGTLKGGYYHGKSRSRDSDKINLVDSIISIDSDDTTDREITSCRRQRRDVDYKKLHDEMFGKDVPENEQVSEDEDWGPGRRKRRGKESDAAGTLVALCGLGDGRSNVIHIEAKNKLPSVSEDKKTLFRIPPNAVEKLRRVFAENELPSRAVRENLSKQLGLASEKVNKWFKNARYTALKIRKAKSTKQLHTSVSKESSAATRKNRTADRVASNVNSYLVPLTTGSQIPKNLRKVHRRKNPKSMTALSKKQQKRAIGALPTNINEVSTWLSNAVSLKKQMTSLKRKASLEKKRVNPKCEIGTSYLNETKNKEQLYLVEMERLCCLDNKLEKLKEVLLRICNGKNHVSDETHLDERLVIYVPVAELREKV* 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00917 764 CDD homeodomain 519 580 IPR001356 GO:0003677
Eupl09g00917 764 MobiDBLite consensus disorder prediction 584 603 - -
Eupl09g00917 764 ProSiteProfiles 'Homeobox' domain profile. 516 576 IPR001356 GO:0003677
Eupl09g00917 764 SUPERFAMILY FYVE/PHD zinc finger 231 297 IPR011011 -
Eupl09g00917 764 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 231 288 IPR013083 -
Eupl09g00917 764 FunFam pathogenesis-related homeodomain protein-like 231 291 - -
Eupl09g00917 764 SUPERFAMILY Homeodomain-like 518 582 IPR009057 -
Eupl09g00917 764 MobiDBLite consensus disorder prediction 62 83 - -
Eupl09g00917 764 ProSiteProfiles Zinc finger PHD-type profile. 237 294 IPR019787 -
Eupl09g00917 764 SMART HOX_1 518 580 IPR001356 GO:0003677
Eupl09g00917 764 SMART PHD_3 239 292 IPR001965 -
Eupl09g00917 764 MobiDBLite consensus disorder prediction 42 151 - -
Eupl09g00917 764 MobiDBLite consensus disorder prediction 370 397 - -
Eupl09g00917 764 MobiDBLite consensus disorder prediction 353 369 - -
Eupl09g00917 764 CDD PHD_PRHA_like 239 291 IPR045876 -
Eupl09g00917 764 ProSitePatterns Zinc finger PHD-type signature. 240 291 IPR019786 -
Eupl09g00917 764 Pfam PHD-finger 239 294 IPR019787 -
Eupl09g00917 764 Gene3D - 518 592 - -
Eupl09g00917 764 MobiDBLite consensus disorder prediction 458 484 - -
Eupl09g00917 764 MobiDBLite consensus disorder prediction 325 412 - -
Eupl09g00917 764 MobiDBLite consensus disorder prediction 586 603 - -
Eupl09g00917 764 Pfam Homeodomain 526 571 IPR001356 GO:0003677
Eupl09g00917 764 PANTHER POLYCOMB-LIKE TRANSCRIPTION FACTOR 30 763 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00917 Eupl-Chr9 18965166 18975946 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00917 145 584 Homeobox Transcription Factor Family AT4G29940 55.405 6.55e-151 457
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-PHD Eupl09g00917 Homeodomain 5.5e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00917 - - nnu:104609048 891.338