Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00891 ATGGATGGGGTGACTAAGGAGGAGACATTGCCTCCAGGATTCAGGTTTCATCCTACTGATGAAGAACTCATCACCTACTATCTCACCCACAAGATATCCGACGCTACTTTCACTGGAAGAGCAATCGGAGACGTTGATCTCAACAAATGCGAACCGTGGGACCTTCCAGGAAAGGCAAAAATGGGGGAAAAGGAGTGGTACTTCTTCAGCCTTCGAGATCGGAAATACCCAACCGGCGTACGAACAAACCGCGCGACGAACGCTGGTTACTGGAAGACAACTGGGAAGGACAAGGAGATCTTCAATTCCGTCACCTCGGAGTTGGTCGGGATGAAGAAGACATTGGTGTTCTATAGAGGGAGAGCTCCAAGGGGAGAGAAAACCAACTGGGTCATGCATGAATACCGCCTCCATTCGAAAACTACCTTCAGAACTACTAAGGATGAATGGGTGGTTTGCCGCGTATTCCAGAAGAGTGCGGGTGGGAAGAAGTACCCCACAAACCAATCCAGAGCTAATACATACAACCTCGAAATCGGTCAAGGCGTCATGCCGGCAATGATGCAGACCGATACATGTCACTTCCCGATTGGAAGGAACTATGTAAGCAATGCTGACCTAGCAGAGCTTCAAAGGGTCCTGAGGGGTTCACCAAGTGTGAGCCTACCAATGCAACCCCAGTCAAACTACCCAGGATGCTTCACAATATCAGGGTTAAATTTAAACCTCGGGGCATCGACACAACCGGCATATCGGGCAATGCCGCCAACGTTGCACCAACAATCGATAGCCACGGATAATGCATCGTCATCTATGTTGCCAAATCATGTTATGACAGCAGAGCATGGGTTTAGTGTAGACATGAATGCTAGTGTGAACAACAGGTACCAACATATGGACCCTTGTGTGGACATTGAGAGCTACTGGCCTCCTTACTAA 939 0.4888 MDGVTKEETLPPGFRFHPTDEELITYYLTHKISDATFTGRAIGDVDLNKCEPWDLPGKAKMGEKEWYFFSLRDRKYPTGVRTNRATNAGYWKTTGKDKEIFNSVTSELVGMKKTLVFYRGRAPRGEKTNWVMHEYRLHSKTTFRTTKDEWVVCRVFQKSAGGKKYPTNQSRANTYNLEIGQGVMPAMMQTDTCHFPIGRNYVSNADLAELQRVLRGSPSVSLPMQPQSNYPGCFTISGLNLNLGASTQPAYRAMPPTLHQQSIATDNASSSMLPNHVMTAEHGFSVDMNASVNNRYQHMDPCVDIESYWPPY* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00891 312 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 7 254 - -
Eupl09g00891 312 Pfam No apical meristem (NAM) protein 11 137 IPR003441 GO:0003677|GO:0006355
Eupl09g00891 312 Gene3D NAC domain 19 161 IPR036093 GO:0003677|GO:0006355
Eupl09g00891 312 ProSiteProfiles NAC domain profile. 10 158 IPR003441 GO:0003677|GO:0006355
Eupl09g00891 312 FunFam NAC domain-containing protein 100-like 19 162 - -
Eupl09g00891 312 SUPERFAMILY NAC domain 6 158 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00891 Eupl-Chr9 18608259 18611605 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00891 6 312 NAC Transcription Factor Family AT2G24430 54.790 8.60e-110 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Eupl09g00891 NAM 5.3e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00891 - - nnu:104611706 539.265