Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00888 ATGGGCAGTAATGAGAAGAGCAAGGAAGCAAAAAAATTCCAAAAGAGCTACTTTGATGTGTTGGGTCTTTGCTGCACATCTGAGATTCCTCTAATTGAGAGGATTCTGAAGCCACTTGATGGAATCGAGGAGGTCTCTGTGATTGTTCCATCAAGAACAGTCATCGTTGTTCATGATAATCTCCTCATCTCTCAAATCCAAATAGTTAAGGCGCTAAATTCAGCGAGGCTGGAAGCGAATATTCAAGTATACGGGGAAGAAAAATATGGGAAAAAATGGCCAAGTCCATATACAATGGCTTGTGGTATATTGCTTTTGTTATCATTTTTTAAGTTCCTTTTCCACCCACTCCATTGGCTAGCGGTGGGAGCAGTCGCAGTCGGTCTCCCCCCGATCATATTAAGAAGCATAGCCGCAACACGAAACTTCATGCTCGATGTCAACATTCTTGTATTGATCGCCGTGGGAGGAGCAATTGCTTTAAGAGATTATTGGGAGGCTGGGTCTATTGTCTTCCTATTCACCATTGCAGAGTGGCTTGAATCAAGAGCAAGTCACAAGGCAACAGCAGTGATGTCGTCGTTGATGAACATGGCCCCACAGAAGGCCGTCTTAGCGGAAACTGGACAAGTCATCGACGCCAAAGACGTTAACATGAACACAATCCTTGCCGTTAAGGCTGGAGAAGTAATCCCGATTGACGGAATCGTCGTCGAAGGGAAATGCGAAGTAGACGAAAAGACTTTAACTGGAGAATCCTTCCCAGTTGCTAAACAAAATCAATCTATAGTATGGGCTGGAACTATAAATCTAAATGGTTATATTAGTGTAAAAACCACTGCTCTTGCTGAAGATTGTGTGGTAGCTAAAATGGCAAAGCTTGTAGAGGAGGCCCAAAACAAAAAATCCAAAACACAAAGATTCATAGACAAGTGTGCTAAGTATTACACACCAGCGGTAGTGTTGATATCGGCCGGTCTTGCGGCGGTTCCTGCTGCATTGAGAGTCCATGACCTGAAGCATTGGCTTCATTTAGCTTTGGTTATACTGGTAAGTGCATGCCCATGTGCACTTATCCTATCTACACCCGTCGCGACTTTCTGCGCACTTACGAAGGCTGCGACGACTGGGCTTTTGATCAAGGGGGGAGATTATCTTGAAATTCTAGCTAAAATTAAGATCATGGCTTTCGATAAGACAGGGACGATAACAAGAGGAGAATTCTCGGTGACGGATTTCCGATCACTCTGTCACGATGTTAGCCTAAACACATTGCTCTACTGGGTTTCAAGCATCGAGAGTAAGTCGAGTCACCCAATGGCCACGGCACTTGTGGACTACGGACTGTTCAATACCATTGAACCAAAACCGGAAAATGTTAAGGAATTTCAAAATTTTCCAGGAGAAGGGATTTATGGAGAAATTGATGGGGAAAAGATTTATGTTGGAAATAGGAAAATTGCAATGAGAGCTGGGTGTGAAACAGTACCAACAGTAGGAGGTGACACTATGAAAGGAGCAACAATTGGATACATATTCTCAGGAACAACTCTGGTTGGAATATTCAGCCTTGAGGATGCTTGTCGATCCGGGGTCGCAGAGGCAATCAATGAATTGAAATTGATGGGTATTAAAACCACGATGCTTACGGGAGATAGCCATGTGGCCGCAATGCGGGTACAAAATCAGCTTGCCAATGCTATAGAGGTGATCCATGCAGAACTCCTACCAGAAGAGAAGGTGAGAATCATCGAAGAACTTAAGAAGGAGGGACCAACAGCGATGGTCGGAGACGGTGTGAATGATGCGCCGGCATTAGCTAATGCCGACATTGGTATGTCGATGGGCGTTTCAGGTTCGGCACTTGCAACTGAGACAGGGCACATAATACTCATGTCGAACGACATTCGAAAGATACCCCAAGCTATCCGGCTTGCTAAGAAGACCCATTGGAAAATAGTGGAGAATGTGGGATTATCAATTGTTACTAAGGCTGCTATCCTTGCATTAGCCTTTTCCGGCCACCCACTTTTATGGGCCGCCGTTCTGGCCGATGTCGGTACGTGCTTGGTAGTGATCTTTAATAGCATGCTCCTTTTACGCGGGACCGATGGACATGGACGAAGATGTCACAAATCTTCATGTACCCCACATGTCAATGGACATAGTTCACATGGTGGTTGTGCACATGCGCATCACCCGCATAGTGACCATGACATAGATGCCTGTGGATCGAACCATCTACATAATCTATCTAGCCAACACCAATGTTCTTCACATGGTGATCACACATCAAACTCGTGTGAGCAGAAGAAAGATCACACGATTGCTTCAAGATACCCATGTGGACCCGTTAAGTCGGGTTCATGTGAGAAAGATAGCTGCATGAACACGATTAGCATGCACGATGCACACGATGATCATAATTGTTGTACTGCAAGCACCCACGATATGGCCTCTCATGTGATACATATAAATAAGGTTGCAAATGGAGTACATAGGTGCGAGAATCACTCAAGCCATCATAGACACACCGCGTGCGCGGAGGATGATTCTCTTAGTGAATCAGTTAACCCTAATTGTTCAGAATCGGGCCAACATGACGCTAAGAATGCTAGCCATGACCACTCGAATTCGATTACTTGTGCGACTAATCATCATGACAAAGGATTGGAATCAAGCAACGGACATGTTCATCACTCACATGAAGAGGAGTTAAGCAAGACTAATTGTAGTACTGGTTGCTTGCACGATGGGGATCGACATGTTGAGTGCATGTCTCGGGAAATGATGGGTAGCACGATGGGTAAGGAACATGAGGAATCAACTGCTATGGATGCATGTAAATGTTTAAAGAATAGGGAGATTGGTGGGTGTTGCAGGAGTTTTAGGAAGGAATGTGGAAGGACTCATGGGTGTCACGGAGGTGGTATAGAAGGCTTATCAGAGATCGTCACAGAGTAG 2964 0.4494 MGSNEKSKEAKKFQKSYFDVLGLCCTSEIPLIERILKPLDGIEEVSVIVPSRTVIVVHDNLLISQIQIVKALNSARLEANIQVYGEEKYGKKWPSPYTMACGILLLLSFFKFLFHPLHWLAVGAVAVGLPPIILRSIAATRNFMLDVNILVLIAVGGAIALRDYWEAGSIVFLFTIAEWLESRASHKATAVMSSLMNMAPQKAVLAETGQVIDAKDVNMNTILAVKAGEVIPIDGIVVEGKCEVDEKTLTGESFPVAKQNQSIVWAGTINLNGYISVKTTALAEDCVVAKMAKLVEEAQNKKSKTQRFIDKCAKYYTPAVVLISAGLAAVPAALRVHDLKHWLHLALVILVSACPCALILSTPVATFCALTKAATTGLLIKGGDYLEILAKIKIMAFDKTGTITRGEFSVTDFRSLCHDVSLNTLLYWVSSIESKSSHPMATALVDYGLFNTIEPKPENVKEFQNFPGEGIYGEIDGEKIYVGNRKIAMRAGCETVPTVGGDTMKGATIGYIFSGTTLVGIFSLEDACRSGVAEAINELKLMGIKTTMLTGDSHVAAMRVQNQLANAIEVIHAELLPEEKVRIIEELKKEGPTAMVGDGVNDAPALANADIGMSMGVSGSALATETGHIILMSNDIRKIPQAIRLAKKTHWKIVENVGLSIVTKAAILALAFSGHPLLWAAVLADVGTCLVVIFNSMLLLRGTDGHGRRCHKSSCTPHVNGHSSHGGCAHAHHPHSDHDIDACGSNHLHNLSSQHQCSSHGDHTSNSCEQKKDHTIASRYPCGPVKSGSCEKDSCMNTISMHDAHDDHNCCTASTHDMASHVIHINKVANGVHRCENHSSHHRHTACAEDDSLSESVNPNCSESGQHDAKNASHDHSNSITCATNHHDKGLESSNGHVHHSHEEELSKTNCSTGCLHDGDRHVECMSREMMGSTMGKEHEESTAMDACKCLKNREIGGCCRSFRKECGRTHGCHGGGIEGLSEIVTE* 988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00888 987 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED 9 702 - -
Eupl09g00888 987 Gene3D - 389 647 IPR023214 -
Eupl09g00888 987 NCBIfam cadmium family heavy metal-translocating P-type ATPase 147 488 - -
Eupl09g00888 987 FunFam Putative cadmium/zinc-transporting ATPase 3 407 528 - -
Eupl09g00888 987 SFLD Haloacid Dehalogenase 379 648 - -
Eupl09g00888 987 CDD P-type_ATPase_HM 119 698 - -
Eupl09g00888 987 ProSitePatterns E1-E2 ATPases phosphorylation site. 398 404 IPR018303 -
Eupl09g00888 987 ProSiteProfiles Heavy-metal-associated domain profile. 14 80 IPR006121 GO:0046872
Eupl09g00888 987 NCBIfam HAD-IC family P-type ATPase 170 673 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Eupl09g00888 987 PRINTS Copper-transporting ATPase signature 187 205 - -
Eupl09g00888 987 PRINTS Copper-transporting ATPase signature 574 591 - -
Eupl09g00888 987 PRINTS Copper-transporting ATPase signature 631 645 - -
Eupl09g00888 987 SUPERFAMILY HAD-like 396 697 IPR036412 -
Eupl09g00888 987 Gene3D - 407 528 IPR023299 GO:0000166
Eupl09g00888 987 SUPERFAMILY HMA, heavy metal-associated domain 12 80 IPR036163 GO:0046872
Eupl09g00888 987 SUPERFAMILY Calcium ATPase, transmembrane domain M 147 390 IPR023298 -
Eupl09g00888 987 Gene3D - 185 299 - -
Eupl09g00888 987 Gene3D - 9 83 - -
Eupl09g00888 987 FunFam Copper-transporting ATPase 1, putative 185 299 - -
Eupl09g00888 987 Pfam haloacid dehalogenase-like hydrolase 392 610 - -
Eupl09g00888 987 SFLD p-type atpase 379 648 IPR044492 -
Eupl09g00888 987 FunFam Putative cadmium/zinc-transporting ATPase 3 10 83 - -
Eupl09g00888 987 MobiDBLite consensus disorder prediction 875 889 - -
Eupl09g00888 987 SUPERFAMILY Calcium ATPase, transduction domain A 210 295 IPR008250 -
Eupl09g00888 987 PRINTS P-type cation-transporting ATPase superfamily signature 245 259 - -
Eupl09g00888 987 PRINTS P-type cation-transporting ATPase superfamily signature 542 552 - -
Eupl09g00888 987 PRINTS P-type cation-transporting ATPase superfamily signature 620 632 - -
Eupl09g00888 987 PRINTS P-type cation-transporting ATPase superfamily signature 396 410 - -
Eupl09g00888 987 PRINTS P-type cation-transporting ATPase superfamily signature 596 615 - -
Eupl09g00888 987 PRINTS P-type cation-transporting ATPase superfamily signature 520 531 - -
Eupl09g00888 987 Pfam E1-E2 ATPase 206 374 - -
Eupl09g00888 987 MobiDBLite consensus disorder prediction 858 903 - -
Eupl09g00888 987 NCBIfam heavy metal translocating P-type ATPase 147 699 IPR027256 GO:0006812|GO:0016020|GO:0019829
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00888 Eupl-Chr9 18551191 18561067 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00888 10 987 Primary Pumps ATPases AT4G30110 55.399 0.0 1043
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00888 K01534 - nnu:104611703 1217.6