Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00875 ATGGATCGAAAACAAGTCGAAGACATGATCGGTTGTGCTGCAAATCAATCACAGATTCCCTCGATCTTCAACTGCAACATGAAGCGAAGCGCATACGAATTTGATTTGGATGAGTTTCTGAGGCCTGCGATTGTATCGAAAATCGGCGATAATGATAATCTGAGACCGAAAGATGAGAGAATTCGCGAAATTAGGGTTCAGAAAGCTAGGATTTGTGGAGAAACTGAAGGTTTCTTTGGCGTTCAAGGAGAAGAGAAATGCTTCGATGATGTTTATGCAGGCGATCTGAGCAGCTTCAGTTTCGAAGATCGGGAGACAATAAGCAGCTTTGCAAGCTGTAGGGGTGGAGTAACAGAAAGCCTTCTATGGACTCAGAATTTCACTCCCGAACATCCAAGCATTTCGGCAACCATCGACTCGCAATCATCGATATGCGGACCTGTATCTAGCAGTTTAACATTCGGATGCACCGCCACTGGGTCAGCTGGAAGTCCAACCTCAGCTCATAAACCAAAGAGCGGAGATAATCAAGCACGGCGAGCTGTTAGCGGTTCCTCTGGGGAGCAATTAGATGATGACGACAGAGAGATGGAAGCTGGTCCATGCGAACAAAGCACTGAACCCATTGATTTAAAGTACATCAGAAGGAAGGTGTCGAATATGGAATCTGCTAGACGATCGAGAAGAAGAAAGCAAGCACACGTAGCAGATCTTGAGTTTCAGGTTGACCAACTGAATGGAGAACATGTTTCTCTTTGCAAGCAACTTACGAATGCTAATCAACAATTCAGTGAAGCCAATAGAGATAACCGGGTGCTTAAATCAGATGTGGAAGCTTTGAGAATGCAGGTAAAGTTGGCCGAGGAGATGATTGCTCAAGGCTCTCTGACTTGTAGTTTGAACCATCTCCTGCAAAGCTGTTCTATTTCACCCCAACCGTTCAATACCCACAACTTATGCCGGGTGTCCGAGGTCTCACCAACCTTGGGAGTTCATGGAGATGAGGCCTCTTATGCTTGCATGTCAATTTCCGGACAGATTTCGGCCTTGGGGTTGGGAAATGGGAACTTGCAGAATGGTGGTATCAAGAATAGACTGCATCGGAACACACCACCATCACAGAGGATTGCGAGCTTGGAACACCTACAGAGTAGTATTGTCAGTGAGGCTGTGAGCTGCGTGTCAGAGACTTGGTAA 1197 0.462 MDRKQVEDMIGCAANQSQIPSIFNCNMKRSAYEFDLDEFLRPAIVSKIGDNDNLRPKDERIREIRVQKARICGETEGFFGVQGEEKCFDDVYAGDLSSFSFEDRETISSFASCRGGVTESLLWTQNFTPEHPSISATIDSQSSICGPVSSSLTFGCTATGSAGSPTSAHKPKSGDNQARRAVSGSSGEQLDDDDREMEAGPCEQSTEPIDLKYIRRKVSNMESARRSRRRKQAHVADLEFQVDQLNGEHVSLCKQLTNANQQFSEANRDNRVLKSDVEALRMQVKLAEEMIAQGSLTCSLNHLLQSCSISPQPFNTHNLCRVSEVSPTLGVHGDEASYACMSISGQISALGLGNGNLQNGGIKNRLHRNTPPSQRIASLEHLQSSIVSEAVSCVSETW* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00875 398 Gene3D - 212 293 - -
Eupl09g00875 398 PANTHER BASIC LEUCINE ZIPPER 63 8 388 - -
Eupl09g00875 398 FunFam BZIP transcription factor 210 261 - -
Eupl09g00875 398 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 215 230 IPR004827 GO:0003700|GO:0006355
Eupl09g00875 398 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 210 273 IPR004827 GO:0003700|GO:0006355
Eupl09g00875 398 CDD bZIP_plant_GBF1 214 264 IPR045314 GO:0003700|GO:0006355
Eupl09g00875 398 MobiDBLite consensus disorder prediction 159 184 - -
Eupl09g00875 398 SUPERFAMILY Leucine zipper domain 213 262 IPR046347 GO:0003700|GO:0006355
Eupl09g00875 398 SMART brlzneu 208 272 IPR004827 GO:0003700|GO:0006355
Eupl09g00875 398 Coils Coil 242 290 - -
Eupl09g00875 398 Pfam bZIP transcription factor 211 264 IPR004827 GO:0003700|GO:0006355
Eupl09g00875 398 MobiDBLite consensus disorder prediction 159 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00875 Eupl-Chr9 18383055 18387412 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00875 119 398 bZIP Transcription Factor Family AT5G24800 43.929 6.94e-61 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Eupl09g00875 bZIP_1 6.3e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00875 K25784 - nnu:104599156 486.493