Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00861 ATGGCTGCCCGAATTCTTCCCTCCCCAGCCCCCAAAAATTTGAATTCTTCAGCTTCCCACGTTCGAATTTTCTTCGGTAATTTGACATGTAACGCTCGATTTCCTGTAAAAATCTCCCCTTCTCCCGCCAAATCTTCTTCAAAACTCGATCTTTCACTTTGCCCGAATCGATTTCCTGAGACTCTTCGACGAGCATCATCCACCGTTGAAAATGGTGGGAACTCGGACGATGAATCATTAATCACCGAAGCACGAGAGGCTATATCGGAGATTCTGCAAGAAGCAGGAGCATCGAAGGAAGAATCAATAAATGTTGCTACGAATTCACCGAAGTATGTTAAAATGTTGATGGATAGTGTTCGTGATTTGGATGAGCTTTCACTCTGGAAATCATGGAGGGCTGAAGACGAAGATGTGGATGCTCTATCTTTTAAGAAGAAGGTGTTTTACATGGCTAAGGAGAAAGGCGATAATGGGATACTTCCATTTTTGGAGAGCGTCGGACTGAATTTGCTGTCCTCCACTCATATTGCACGGTATCTCGCCTCGGAGTCGCTTCCGAAGCTCATTAACAAGGTTAAATATGTGAAGGAAATGTTATTTTCTGGCAGTGACAATGAAGAGTTCATCGGGAAGAATGCACGTCGAATGATGACGCAACTATCAATTTTTATTGACGAGGATGTCCAACAAATCTTATCATTTTTTGAAAAGATGGAAGCAAAGCGTGGAGGTCTGAACATGTTGGGTTCCAAAGATGCCTCTTTCCAATACCTCATTGAATCTTTTCCACGTCTTCTTTTGCTATCAGTGGAAAACCATCTGGAACCTTTGGTTGAATTTCTTGAAGATGTTGGAGTTCCCAAAGGACGCATTAGAGTTATTCTTCTGTTATTTCCCCCAATTATGTTCTATGACATAGAGAAGGACATAAAACCAAGATTACATGCTTTTGAAAAGGTTGGTGCAGACAACAAAGATATTAGTAGGATGCTTTTGAAATATCCATGGATTCTTTCAACAAGCATTCAAGAAAACTATGAGGAGATCCTTTTGTTCTTTGAAATGGAGAAGGTACCAAAAGTGAATATTGATCGTGCAATCAAAAGCTGGCCTCATCTGTTGGGATGTTCAACCAGCAAGATGAAGTTGATGGTGGAGCAATTTGGTGAATTCGGTGTTAGAAACAAGAAGCTGGGTCAGGTTATTGCTTCAAGTCCTCAGCTGCTACTACGAAAACCTCACGAATTTCTCCAGGTGGTTTCGTTTATGGAAGAGCTGGGTTTTTATGAGGAAAGCATGGGGAGGATACTGAGTCGCTGTCCAGAAATTTTTGCTGCCAGCATTGAGAAAACCCTCAGGAAGAAGCTTAAATTCCTTATCGATATTGGCATCTCAAAAGACCATTTTCCTCGGGTTATCAAAAAATATCCAGAGCTTCTCGTGTCTGATACTGACCGCACTTTACTTCCACGGATGAAGTATTTGATGAAAACTGGGCTGTCTAAGATGGAGGTGGCATCCATGGTCCGTAGATTCTCTCCTTTACTAGGATACAGCATTGATGAGGTTCTGAGACCGAAGCTCGAATTCCTTGTGAACACCATGGGAAGGCCTGTAAGGGACATTGTGGAGTACCCCAGGTACTTCAGCTACTCCTTGGACAAGAAGATAAAGCCCAGATTCTGGGTGCTTAAGGGCAGGAATGTGGATTGCAGCTTAAAAGATATGTTGGGTAAGAATGACGAGGAATTTGCAGAGGAGTACATGGGTATTGGAAGGTTACTTGTTCCCCCGTCCCCTTCCCCTTCCTCTTCCCAATAA 1824 0.4271 MAARILPSPAPKNLNSSASHVRIFFGNLTCNARFPVKISPSPAKSSSKLDLSLCPNRFPETLRRASSTVENGGNSDDESLITEAREAISEILQEAGASKEESINVATNSPKYVKMLMDSVRDLDELSLWKSWRAEDEDVDALSFKKKVFYMAKEKGDNGILPFLESVGLNLLSSTHIARYLASESLPKLINKVKYVKEMLFSGSDNEEFIGKNARRMMTQLSIFIDEDVQQILSFFEKMEAKRGGLNMLGSKDASFQYLIESFPRLLLLSVENHLEPLVEFLEDVGVPKGRIRVILLLFPPIMFYDIEKDIKPRLHAFEKVGADNKDISRMLLKYPWILSTSIQENYEEILLFFEMEKVPKVNIDRAIKSWPHLLGCSTSKMKLMVEQFGEFGVRNKKLGQVIASSPQLLLRKPHEFLQVVSFMEELGFYEESMGRILSRCPEIFAASIEKTLRKKLKFLIDIGISKDHFPRVIKKYPELLVSDTDRTLLPRMKYLMKTGLSKMEVASMVRRFSPLLGYSIDEVLRPKLEFLVNTMGRPVRDIVEYPRYFSYSLDKKIKPRFWVLKGRNVDCSLKDMLGKNDEEFAEEYMGIGRLLVPPSPSPSSSQ* 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00861 607 Gene3D Transcription termination factor 3, mitochondrial 379 593 IPR038538 -
Eupl09g00861 607 SMART mt_12 507 539 IPR003690 GO:0003690|GO:0006355
Eupl09g00861 607 SMART mt_12 365 395 IPR003690 GO:0003690|GO:0006355
Eupl09g00861 607 SMART mt_12 293 324 IPR003690 GO:0003690|GO:0006355
Eupl09g00861 607 SMART mt_12 329 360 IPR003690 GO:0003690|GO:0006355
Eupl09g00861 607 SMART mt_12 400 430 IPR003690 GO:0003690|GO:0006355
Eupl09g00861 607 SMART mt_12 471 502 IPR003690 GO:0003690|GO:0006355
Eupl09g00861 607 SMART mt_12 540 571 IPR003690 GO:0003690|GO:0006355
Eupl09g00861 607 SMART mt_12 435 466 IPR003690 GO:0003690|GO:0006355
Eupl09g00861 607 SMART mt_12 257 288 IPR003690 GO:0003690|GO:0006355
Eupl09g00861 607 PANTHER CGI-12 PROTEIN-RELATED 493 590 IPR003690 GO:0003690|GO:0006355
Eupl09g00861 607 FunFam Mitochondrial transcription termination factor family protein 380 593 - -
Eupl09g00861 607 Pfam mTERF 279 586 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00861 Eupl-Chr9 18170679 18178943 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Eupl09g00861 mTERF 2.9e-107 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00861 K15031 - nnu:104599198 869.766