Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00839 ATGGCAACCCGACTTCAGTTTGAGAACTCATGCGAAGTTGGGGTATTCTCAAAGCTGACAAATGCTTACTGTTTGGTTGCAATTGGAGGATCAGAAAGCTTCTATAGCACGTTCGAATCTGAGCTTGCAGATGTCATCCCTGTGGTTAAAACCTCCATAGCAGGCACTAGAATAATTGGACGGCTCTGTGCTGGAAACAAAAAAGGTCTTCTCTTGCCACACAACACAACTGACCAAGAGCTTCAACACTTGAGGAACAGTTTGCCTGATCAAGTTGTTGTTCAACGCATTGAAGAGAGACTGTCTGCTTTGGGGAACTGCATAGCTTGCAACGACCATGTTGCTCTTACACATACTGATCTTGACAAGGAAACTGAGGAGATGATTGCAGATGTTCTTGGAGTAGAAGTGTTCAGACAGACGATTGCTGGAAACATTCTTGTGGGCAGTTACTGTGCTTTTTCAAACCGGGGCGGATTGGTCCATCCCCATACATCAATTGAAGACTTGGATGAGCTTTCAACGCTCCTTCAAGTCCCTCTGGTGGCCGGGACTGTGAACCGTGGTAGTGAAGTCATTGCTGCTGGTATGACGGTCAACGACTGGACGGCATTCTGTGGGTCAGACACCACGGCTACGGAACTTTCTGTCATCGAGAGCGTCTTCAAGTTGAGGGAAGCCCAACCTAGTGCGATTGTTGATGAGATGAGGAAATCGTTGATCGACAGCTATGTTTGA 738 0.4702 MATRLQFENSCEVGVFSKLTNAYCLVAIGGSESFYSTFESELADVIPVVKTSIAGTRIIGRLCAGNKKGLLLPHNTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTDLDKETEEMIADVLGVEVFRQTIAGNILVGSYCAFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGMTVNDWTAFCGSDTTATELSVIESVFKLREAQPSAIVDEMRKSLIDSYV* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00839 245 PIRSF Transl_init_IF-6 1 226 IPR002769 GO:0042256|GO:0043022
Eupl09g00839 245 Gene3D - 1 225 - -
Eupl09g00839 245 SMART eIF6neu2 3 204 IPR002769 GO:0042256|GO:0043022
Eupl09g00839 245 FunFam Eukaryotic translation initiation factor 6 1 225 - -
Eupl09g00839 245 CDD IF6 2 223 IPR002769 GO:0042256|GO:0043022
Eupl09g00839 245 NCBIfam translation initiation factor IF-6 4 224 IPR002769 GO:0042256|GO:0043022
Eupl09g00839 245 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 1 244 IPR002769 GO:0042256|GO:0043022
Eupl09g00839 245 Pfam eIF-6 family 4 203 IPR002769 GO:0042256|GO:0043022
Eupl09g00839 245 Hamap Translation initiation factor 6 [eif6]. 1 245 IPR002769 GO:0042256|GO:0043022
Eupl09g00839 245 SUPERFAMILY Pentein 1 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00839 Eupl-Chr9 17903586 17910040 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00839 1 245 Eukaryotic Initiation Factors Gene Family AT3G55620 91.020 7.48e-172 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00839 K03264 - msin:131228626 474.552