LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Eupl09g00834	ATGTGGCTCCCAAAGGGGAATGGAGAAAGGAAGGAAGAAGGAAATGGGTTGGTAGCAGTTGCCATAGACAAGGACAAAGGCAGTCAGTATGCTTTGAAATGGGCTGTTGATAATCTTCTCAGCAAGGGTCAGACTGTAATACTAGTCCATATCAACCAAAAATCACCATCTGTTCCCAATTCAACGGGAAGTCGTATCTCCCATTCTGATTTCAATGACAATGCATATAGACAACAGATCGACAGTCAAACCAAGGACTTGTTCCTTCCCTTTCGTTGCTTTTGTACGCGAAAAGATATACAATGCCGGGATGTCATCGTCGAAGACATGGATGTAGCAAAAGCAATAATCGAGTATATTACCTATTATGCAATCGAGCATTTGGTCGTCGGTGTCTCGTCGAAGAATTCCTTTCTCAGATTCAAGACTGCAGATGTTCCGTCCACTATATCAAAAGGAGCACCAGATTTCTGCAACGTGTACACTATCTCCAAAGGGAAGGTCGTAACCTTGAGAACTGCCTCCCGGTCAGCCCCCACCATCTCCCCCCTCCAGAACCAAGTCAGCCTGAAACCTGACCCAGCTGAAGCAAATTTATCCAATAATACTAGCTCCAGAGCAGCCGAGATGACACCATTCGAGCCCCGTAGCTTGCAGGATGACATTGACTCCATCAAGTCACCGTTCAACAGAGGAAGAGGTTTTAACGGGAAATCGTATGGGGAGCTTTCAATGACGGATACCGACATATCATTTGTAAGCTCAGGCAGACCAAGCATCGATCGCATGTTCCCTTCGCTCTATGACCATATGGAATCTAGCCGCACCCCACGACTGTCAAACAGCTCAGACATAGACAGCAGGAGCGTCGAGTCACTGCGCTTGGCAACCAAGCCAACCGATAACTTTCTAAATGACTTCTCATCGACCTCACAGGAAAGCGGAAGAACATCATGGTCTTCACAGAACATGGAAGATGTGGAAGCCGAGATGAGGAGGCTAAAGCTCGAGCTCAAGCAAACAATGGACATGTACAGCACAGCCTGCAAAGAAGCACTCACGGCAAAACAGAAGGCAAGAGAGCTTCATCGTTGGAAAATGGAAGAAGAACAAAGATTAGAGGAGGCACGAATGGCTGAGGGAGCTGCTCTAGCAATGGCAGCGAAGGAGAAAGCAAAGTGCAAGGCAGCCATTGAGGCAGCTGAAGCGGCACAGAGGATTGCGGAGTTGGAAGCACAAAAGAGAGTGCATGCAGAGATGAAGGCTCTCAAAGAAGCAGAGGAGAATAAGAAGGTTTTAGAATCTCTGGCTAATTCTGATGTCAGGTACAGGAAGTACTCGATTGAGGAAATTGAAATAGCAACAGAGTTTTTCGTCGAATCTCGTAAGATTGGGGAAGGGGGTTATGGGCCCGTATATAAATGTTATCTGGATCACACACCAGTTGCCGTAAAGGTTCTGCGTCCAGATGCGGCTCAAGGAAGATCACAGTTTCAACAGGAGGTTGAAGTACTAAGCTGCATACGGCATCCTAACATGGTTCTCCTTCTGGGAGCCTGCCCAGAGTATGGCTGTCTAGTCTACGAATACATGGCCCATGGGAGCTTAGACGATCGTCTCTTCCGGCGAGGAAACACCCCAGTTATCCCGTGGCAGCTGAGATTCCGAATCGCGGCAGAGATCGGAACTGGATTGCTCTTCCTACACCAGACCAAGCCGGAACCGCTAGTGCACCGCGACCTCAAACCAGGGAACATCTTGCTTGACCGCAACTATGTCAGTAAGATTAGTGATGTTGGCCTCGCCAGACTTGTCCCTCCAACTGTCGCCAACAATGTCACACAGTACCGCATGACATCAACTGCCGGAACTTTTTGCTACATTGATCCTGAGTACCAGCAAACAGGCATGCTCGGTATAAAATCTGATATTTACTCCCTTGGGATCATGCTTCTACAAATAATAACAGCTAAGCCACCAATGGGCTTGACACACCATGTTGAACGGTCTATTGAGAAGGGGACATTCGCTGAGATGCTGGACCCTGCCGTGCTTGATTGGCCGGTTGAAGAGGCCTTGGGCTTTGCCAAGCTCGCGCTCCAGTGTGCAGAGTTGAGGAGGAAAGATCGGCCAGATCTTGGTAAGGTCGTCTTGCCAGAGCTCAACAGATTGAGATCACTTGCTGAAGAAAATATGCACCACATCATGCTTGGTGGCAGTGCATATGCCTCACCAAACCACAGCCAGATCATGCTCCAGGATGTGATGAGCGACCCTCTGCTCGTTCAATCTGGATACGATAGTTCAAAGAGCCGCTCAAGTGGATCATCTTTGACAGAGAGGCGATCAAGTGTGAACTGA	2361	0.4841	MWLPKGNGERKEEGNGLVAVAIDKDKGSQYALKWAVDNLLSKGQTVILVHINQKSPSVPNSTGSRISHSDFNDNAYRQQIDSQTKDLFLPFRCFCTRKDIQCRDVIVEDMDVAKAIIEYITYYAIEHLVVGVSSKNSFLRFKTADVPSTISKGAPDFCNVYTISKGKVVTLRTASRSAPTISPLQNQVSLKPDPAEANLSNNTSSRAAEMTPFEPRSLQDDIDSIKSPFNRGRGFNGKSYGELSMTDTDISFVSSGRPSIDRMFPSLYDHMESSRTPRLSNSSDIDSRSVESLRLATKPTDNFLNDFSSTSQESGRTSWSSQNMEDVEAEMRRLKLELKQTMDMYSTACKEALTAKQKARELHRWKMEEEQRLEEARMAEGAALAMAAKEKAKCKAAIEAAEAAQRIAELEAQKRVHAEMKALKEAEENKKVLESLANSDVRYRKYSIEEIEIATEFFVESRKIGEGGYGPVYKCYLDHTPVAVKVLRPDAAQGRSQFQQEVEVLSCIRHPNMVLLLGACPEYGCLVYEYMAHGSLDDRLFRRGNTPVIPWQLRFRIAAEIGTGLLFLHQTKPEPLVHRDLKPGNILLDRNYVSKISDVGLARLVPPTVANNVTQYRMTSTAGTFCYIDPEYQQTGMLGIKSDIYSLGIMLLQIITAKPPMGLTHHVERSIEKGTFAEMLDPAVLDWPVEEALGFAKLALQCAELRRKDRPDLGKVVLPELNRLRSLAEENMHHIMLGGSAYASPNHSQIMLQDVMSDPLLVQSGYDSSKSRSSGSSLTERRSSVN*	787

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Eupl09g00834	786	FunFam	Adenine nucleotide alpha hydrolase-like domain kinase	430	530	-	-
	Eupl09g00834	786	Gene3D	HUPs	18	164	IPR014729	-
	Eupl09g00834	786	Pfam	Protein kinase domain	459	712	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Eupl09g00834	786	Gene3D	Transferase(Phosphotransferase) domain 1	531	738	-	-
	Eupl09g00834	786	Gene3D	Phosphorylase Kinase; domain 1	436	530	-	-
	Eupl09g00834	786	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	576	588	IPR008271	GO:0004672\|GO:0006468
	Eupl09g00834	786	SUPERFAMILY	Protein kinase-like (PK-like)	441	717	IPR011009	-
	Eupl09g00834	786	MobiDBLite	consensus disorder prediction	301	324	-	-
	Eupl09g00834	786	Coils	Coil	384	436	-	-
	Eupl09g00834	786	SMART	serkin_6	458	718	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Eupl09g00834	786	CDD	STK_N	17	166	-	-
	Eupl09g00834	786	Pfam	Universal stress protein family	18	154	IPR006016	-
	Eupl09g00834	786	ProSiteProfiles	Protein kinase domain profile.	458	737	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Eupl09g00834	786	SUPERFAMILY	Adenine nucleotide alpha hydrolases-like	18	155	-	-
	Eupl09g00834	786	FunFam	U-box domain-containing protein 51	531	731	-	-
	Eupl09g00834	786	Coils	Coil	324	344	-	-
	Eupl09g00834	786	PANTHER	OS02G0152300 PROTEIN	18	768	-	-
	Eupl09g00834	786	MobiDBLite	consensus disorder prediction	763	786	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Eupl09g00834	Eupl-Chr9	17824317	17834083	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Eupl09g00834	1	752	Receptor kinase-like Gene Family	AT1G78940	60.207	0.0	877

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-IXb	Eupl09g00834		Pkinase	3.6e-40	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Eupl09g00834	-		-	ming:122071683	1124.38